Gene : Eucgr.F04472 E. grandis v2.0
Defline:  (1 of 1) PTHR31810:SF6 - METACASPASE-4-RELATED Genomic Order:  4035
Name:  ? Eucgr.F04472 Secondary Identifier:  ? PAC:32054482
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04472 0.5kb upstream 0.5kb upstream 3071 true Chr06: 57225499-57228569 Eucalyptus grandis
Eucgr.F04472 0.5kb upstream 0.5kb upstream 500 false Chr06: 57228070-57228569 Eucalyptus grandis
Eucgr.F04472 0.5kb downstream 0.5kb downstream 3071 true Chr06: 57224999-57228069 Eucalyptus grandis
Eucgr.F04472 0.5kb downstream 0.5kb downstream 500 false Chr06: 57224999-57225498 Eucalyptus grandis
Eucgr.F04472 1.0kb upstream 1.0kb upstream 3571 true Chr06: 57225499-57229069 Eucalyptus grandis
Eucgr.F04472 1.0kb upstream 1.0kb upstream 1000 false Chr06: 57228070-57229069 Eucalyptus grandis
Eucgr.F04472 1.0kb downstream 1.0kb downstream 3571 true Chr06: 57224499-57228069 Eucalyptus grandis
Eucgr.F04472 1.0kb downstream 1.0kb downstream 1000 false Chr06: 57224499-57225498 Eucalyptus grandis
Eucgr.F04472 2.0kb upstream 2.0kb upstream 4571 true Chr06: 57225499-57230069 Eucalyptus grandis
Eucgr.F04472 2.0kb upstream 2.0kb upstream 2000 false Chr06: 57228070-57230069 Eucalyptus grandis
Eucgr.F04472 2.0kb downstream 2.0kb downstream 4571 true Chr06: 57223499-57228069 Eucalyptus grandis
Eucgr.F04472 2.0kb downstream 2.0kb downstream 2000 false Chr06: 57223499-57225498 Eucalyptus grandis
Eucgr.F04472 5.0kb upstream 5.0kb upstream 7571 true Chr06: 57225499-57233069 Eucalyptus grandis
Eucgr.F04472 5.0kb upstream 5.0kb upstream 5000 false Chr06: 57228070-57233069 Eucalyptus grandis
Eucgr.F04472 5.0kb downstream 5.0kb downstream 7571 true Chr06: 57220499-57228069 Eucalyptus grandis
Eucgr.F04472 5.0kb downstream 5.0kb downstream 5000 false Chr06: 57220499-57225498 Eucalyptus grandis
Eucgr.F04472 10.0kb upstream 10.0kb upstream 12571 true Chr06: 57225499-57238069 Eucalyptus grandis
Eucgr.F04472 10.0kb upstream 10.0kb upstream 10000 false Chr06: 57228070-57238069 Eucalyptus grandis
Eucgr.F04472 10.0kb downstream 10.0kb downstream 12571 true Chr06: 57215499-57228069 Eucalyptus grandis
Eucgr.F04472 10.0kb downstream 10.0kb downstream 10000 false Chr06: 57215499-57225498 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060936 5270 Rosid View MSA
123736617 5271 Pentapetalae View MSA
122792369 5272 Eudicot View MSA
122044539 5273 Angiosperm View MSA
121348821 5274 Embryophyte View MSA
123426896 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 129.28 0.0 305.219 High  
cufflinks 159.504 0.0 382.747 High  
cufflinks 92.0831 0.0 210.983 High Low
cufflinks 129.357 0.0 304.428 High  
cufflinks 286.533 0.0 737.239 High High
cufflinks 110.515 0.0 257.675 High  

0 Strain