Gene : Eucgr.F04376 E. grandis v2.0
Defline:  (1 of 1) PTHR11953:SF0 - EXOSOME COMPLEX COMPONENT RRP41 Genomic Order:  3948
Name:  ? Eucgr.F04376 Secondary Identifier:  ? PAC:32053259
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04376 0.5kb upstream 0.5kb upstream 6580 true Chr06: 56274692-56281271 Eucalyptus grandis
Eucgr.F04376 0.5kb upstream 0.5kb upstream 500 false Chr06: 56274692-56275191 Eucalyptus grandis
Eucgr.F04376 0.5kb downstream 0.5kb downstream 6580 true Chr06: 56275192-56281771 Eucalyptus grandis
Eucgr.F04376 0.5kb downstream 0.5kb downstream 500 false Chr06: 56281272-56281771 Eucalyptus grandis
Eucgr.F04376 1.0kb upstream 1.0kb upstream 7080 true Chr06: 56274192-56281271 Eucalyptus grandis
Eucgr.F04376 1.0kb upstream 1.0kb upstream 1000 false Chr06: 56274192-56275191 Eucalyptus grandis
Eucgr.F04376 1.0kb downstream 1.0kb downstream 7080 true Chr06: 56275192-56282271 Eucalyptus grandis
Eucgr.F04376 1.0kb downstream 1.0kb downstream 1000 false Chr06: 56281272-56282271 Eucalyptus grandis
Eucgr.F04376 2.0kb upstream 2.0kb upstream 8080 true Chr06: 56273192-56281271 Eucalyptus grandis
Eucgr.F04376 2.0kb upstream 2.0kb upstream 2000 false Chr06: 56273192-56275191 Eucalyptus grandis
Eucgr.F04376 2.0kb downstream 2.0kb downstream 8080 true Chr06: 56275192-56283271 Eucalyptus grandis
Eucgr.F04376 2.0kb downstream 2.0kb downstream 2000 false Chr06: 56281272-56283271 Eucalyptus grandis
Eucgr.F04376 5.0kb upstream 5.0kb upstream 11080 true Chr06: 56270192-56281271 Eucalyptus grandis
Eucgr.F04376 5.0kb upstream 5.0kb upstream 5000 false Chr06: 56270192-56275191 Eucalyptus grandis
Eucgr.F04376 5.0kb downstream 5.0kb downstream 11080 true Chr06: 56275192-56286271 Eucalyptus grandis
Eucgr.F04376 5.0kb downstream 5.0kb downstream 5000 false Chr06: 56281272-56286271 Eucalyptus grandis
Eucgr.F04376 10.0kb upstream 10.0kb upstream 16080 true Chr06: 56265192-56281271 Eucalyptus grandis
Eucgr.F04376 10.0kb upstream 10.0kb upstream 10000 false Chr06: 56265192-56275191 Eucalyptus grandis
Eucgr.F04376 10.0kb downstream 10.0kb downstream 16080 true Chr06: 56275192-56291271 Eucalyptus grandis
Eucgr.F04376 10.0kb downstream 10.0kb downstream 10000 false Chr06: 56281272-56291271 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062845 5270 Rosid View MSA
123742104 5271 Pentapetalae View MSA
122787279 5272 Eudicot View MSA
122045515 5273 Angiosperm View MSA
121344104 5274 Embryophyte View MSA
123423845 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.20603 0.0 12.8607   High
cufflinks 3.35428 0.0 8.61838    
cufflinks 4.02335 0.0 10.1807    
cufflinks 1.55065 0.0 4.29757   Low
cufflinks 2.40202 0.0 6.40266    
cufflinks 1.89876 0.0 5.2172    

0 Strain