Gene : Eucgr.F04353 E. grandis v2.0
Defline:  (1 of 5) PF05340 - Protein of unknown function (DUF740) (DUF740) Genomic Order:  3927
Name:  ? Eucgr.F04353 Secondary Identifier:  ? PAC:32057218
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04353 0.5kb upstream 0.5kb upstream 2540 true Chr06: 56016304-56018843 Eucalyptus grandis
Eucgr.F04353 0.5kb upstream 0.5kb upstream 500 false Chr06: 56018344-56018843 Eucalyptus grandis
Eucgr.F04353 0.5kb downstream 0.5kb downstream 2540 true Chr06: 56015804-56018343 Eucalyptus grandis
Eucgr.F04353 0.5kb downstream 0.5kb downstream 500 false Chr06: 56015804-56016303 Eucalyptus grandis
Eucgr.F04353 1.0kb upstream 1.0kb upstream 3040 true Chr06: 56016304-56019343 Eucalyptus grandis
Eucgr.F04353 1.0kb upstream 1.0kb upstream 1000 false Chr06: 56018344-56019343 Eucalyptus grandis
Eucgr.F04353 1.0kb downstream 1.0kb downstream 3040 true Chr06: 56015304-56018343 Eucalyptus grandis
Eucgr.F04353 1.0kb downstream 1.0kb downstream 1000 false Chr06: 56015304-56016303 Eucalyptus grandis
Eucgr.F04353 2.0kb upstream 2.0kb upstream 4040 true Chr06: 56016304-56020343 Eucalyptus grandis
Eucgr.F04353 2.0kb upstream 2.0kb upstream 2000 false Chr06: 56018344-56020343 Eucalyptus grandis
Eucgr.F04353 2.0kb downstream 2.0kb downstream 4040 true Chr06: 56014304-56018343 Eucalyptus grandis
Eucgr.F04353 2.0kb downstream 2.0kb downstream 2000 false Chr06: 56014304-56016303 Eucalyptus grandis
Eucgr.F04353 5.0kb upstream 5.0kb upstream 7040 true Chr06: 56016304-56023343 Eucalyptus grandis
Eucgr.F04353 5.0kb upstream 5.0kb upstream 5000 false Chr06: 56018344-56023343 Eucalyptus grandis
Eucgr.F04353 5.0kb downstream 5.0kb downstream 7040 true Chr06: 56011304-56018343 Eucalyptus grandis
Eucgr.F04353 5.0kb downstream 5.0kb downstream 5000 false Chr06: 56011304-56016303 Eucalyptus grandis
Eucgr.F04353 10.0kb upstream 10.0kb upstream 12040 true Chr06: 56016304-56028343 Eucalyptus grandis
Eucgr.F04353 10.0kb upstream 10.0kb upstream 10000 false Chr06: 56018344-56028343 Eucalyptus grandis
Eucgr.F04353 10.0kb downstream 10.0kb downstream 12040 true Chr06: 56006304-56018343 Eucalyptus grandis
Eucgr.F04353 10.0kb downstream 10.0kb downstream 10000 false Chr06: 56006304-56016303 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067867 5270 Rosid View MSA
123750206 5271 Pentapetalae View MSA
122796157 5272 Eudicot View MSA
122043304 5273 Angiosperm View MSA
121310104 5274 Embryophyte View MSA
123347686 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.4624 0.0 33.2967    
cufflinks 18.6651 0.0 42.1734   High
cufflinks 11.0069 0.0 25.9127    
cufflinks 4.06624 0.0 10.5282    
cufflinks 2.2365 0.0 6.13303   Low
cufflinks 10.9368 0.0 25.9035    

0 Strain