Gene : Eucgr.F04330 E. grandis v2.0
Defline:  (1 of 1) PTHR32161:SF8 - PROTEIN TAG-10, ISOFORM A Genomic Order:  3904
Name:  ? Eucgr.F04330 Secondary Identifier:  ? PAC:32052887
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04330 0.5kb upstream 0.5kb upstream 4020 true Chr06: 55860152-55864171 Eucalyptus grandis
Eucgr.F04330 0.5kb upstream 0.5kb upstream 500 false Chr06: 55860152-55860651 Eucalyptus grandis
Eucgr.F04330 0.5kb downstream 0.5kb downstream 4020 true Chr06: 55860652-55864671 Eucalyptus grandis
Eucgr.F04330 0.5kb downstream 0.5kb downstream 500 false Chr06: 55864172-55864671 Eucalyptus grandis
Eucgr.F04330 1.0kb upstream 1.0kb upstream 4520 true Chr06: 55859652-55864171 Eucalyptus grandis
Eucgr.F04330 1.0kb upstream 1.0kb upstream 1000 false Chr06: 55859652-55860651 Eucalyptus grandis
Eucgr.F04330 1.0kb downstream 1.0kb downstream 4520 true Chr06: 55860652-55865171 Eucalyptus grandis
Eucgr.F04330 1.0kb downstream 1.0kb downstream 1000 false Chr06: 55864172-55865171 Eucalyptus grandis
Eucgr.F04330 2.0kb upstream 2.0kb upstream 5520 true Chr06: 55858652-55864171 Eucalyptus grandis
Eucgr.F04330 2.0kb upstream 2.0kb upstream 2000 false Chr06: 55858652-55860651 Eucalyptus grandis
Eucgr.F04330 2.0kb downstream 2.0kb downstream 5520 true Chr06: 55860652-55866171 Eucalyptus grandis
Eucgr.F04330 2.0kb downstream 2.0kb downstream 2000 false Chr06: 55864172-55866171 Eucalyptus grandis
Eucgr.F04330 5.0kb upstream 5.0kb upstream 8520 true Chr06: 55855652-55864171 Eucalyptus grandis
Eucgr.F04330 5.0kb upstream 5.0kb upstream 5000 false Chr06: 55855652-55860651 Eucalyptus grandis
Eucgr.F04330 5.0kb downstream 5.0kb downstream 8520 true Chr06: 55860652-55869171 Eucalyptus grandis
Eucgr.F04330 5.0kb downstream 5.0kb downstream 5000 false Chr06: 55864172-55869171 Eucalyptus grandis
Eucgr.F04330 10.0kb upstream 10.0kb upstream 13520 true Chr06: 55850652-55864171 Eucalyptus grandis
Eucgr.F04330 10.0kb upstream 10.0kb upstream 10000 false Chr06: 55850652-55860651 Eucalyptus grandis
Eucgr.F04330 10.0kb downstream 10.0kb downstream 13520 true Chr06: 55860652-55874171 Eucalyptus grandis
Eucgr.F04330 10.0kb downstream 10.0kb downstream 10000 false Chr06: 55864172-55874171 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060689 5270 Rosid View MSA
123739099 5271 Pentapetalae View MSA
122785681 5272 Eudicot View MSA
122050472 5273 Angiosperm View MSA
121347738 5274 Embryophyte View MSA
123424154 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.9865 0.0 37.6117    
cufflinks 19.6138 0.0 43.3814    
cufflinks 15.5433 0.0 34.4938    
cufflinks 13.4137 0.0 29.8702   Low
cufflinks 19.5749 0.0 43.2995    
cufflinks 21.326 0.0 47.1764   High

0 Strain