Gene : Eucgr.F04260 E. grandis v2.0
Defline:  (1 of 1) PTHR10509:SF27 - PROTEIN COMT-1 Genomic Order:  3788
Name:  ? Eucgr.F04260 Secondary Identifier:  ? PAC:32056521
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1121 Eucalyptus grandis pathologic  
Egrandis PWY-361 Eucalyptus grandis pathologic  
Egrandis PWY-7498 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04260 0.5kb upstream 0.5kb upstream 6478 true Chr06: 53357079-53363556 Eucalyptus grandis
Eucgr.F04260 0.5kb upstream 0.5kb upstream 500 false Chr06: 53363057-53363556 Eucalyptus grandis
Eucgr.F04260 0.5kb downstream 0.5kb downstream 6478 true Chr06: 53356579-53363056 Eucalyptus grandis
Eucgr.F04260 0.5kb downstream 0.5kb downstream 500 false Chr06: 53356579-53357078 Eucalyptus grandis
Eucgr.F04260 1.0kb upstream 1.0kb upstream 6978 true Chr06: 53357079-53364056 Eucalyptus grandis
Eucgr.F04260 1.0kb upstream 1.0kb upstream 1000 false Chr06: 53363057-53364056 Eucalyptus grandis
Eucgr.F04260 1.0kb downstream 1.0kb downstream 6978 true Chr06: 53356079-53363056 Eucalyptus grandis
Eucgr.F04260 1.0kb downstream 1.0kb downstream 1000 false Chr06: 53356079-53357078 Eucalyptus grandis
Eucgr.F04260 2.0kb upstream 2.0kb upstream 7978 true Chr06: 53357079-53365056 Eucalyptus grandis
Eucgr.F04260 2.0kb upstream 2.0kb upstream 2000 false Chr06: 53363057-53365056 Eucalyptus grandis
Eucgr.F04260 2.0kb downstream 2.0kb downstream 7978 true Chr06: 53355079-53363056 Eucalyptus grandis
Eucgr.F04260 2.0kb downstream 2.0kb downstream 2000 false Chr06: 53355079-53357078 Eucalyptus grandis
Eucgr.F04260 5.0kb upstream 5.0kb upstream 10978 true Chr06: 53357079-53368056 Eucalyptus grandis
Eucgr.F04260 5.0kb upstream 5.0kb upstream 5000 false Chr06: 53363057-53368056 Eucalyptus grandis
Eucgr.F04260 5.0kb downstream 5.0kb downstream 10978 true Chr06: 53352079-53363056 Eucalyptus grandis
Eucgr.F04260 5.0kb downstream 5.0kb downstream 5000 false Chr06: 53352079-53357078 Eucalyptus grandis
Eucgr.F04260 10.0kb upstream 10.0kb upstream 15978 true Chr06: 53357079-53373056 Eucalyptus grandis
Eucgr.F04260 10.0kb upstream 10.0kb upstream 10000 false Chr06: 53363057-53373056 Eucalyptus grandis
Eucgr.F04260 10.0kb downstream 10.0kb downstream 15978 true Chr06: 53347079-53363056 Eucalyptus grandis
Eucgr.F04260 10.0kb downstream 10.0kb downstream 10000 false Chr06: 53347079-53357078 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062040 5270 Rosid View MSA
123738490 5271 Pentapetalae View MSA
122794453 5272 Eudicot View MSA
122046584 5273 Angiosperm View MSA
121345424 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.34572 0.0 20.0943    
cufflinks 1.66944 0.0 4.87117    
cufflinks 5.26497 0.0 16.5473    
cufflinks 1.71097 0.0 5.02797    
cufflinks 1.43797 0.0 4.37107   Low
cufflinks 8.28365 0.0 22.1699   High

0 Strain