Gene : Eucgr.F04136 E. grandis v2.0
Defline:  (1 of 1) PF14770 - Transmembrane protein 18 (TMEM18) Genomic Order:  3682
Name:  ? Eucgr.F04136 Secondary Identifier:  ? PAC:32052582
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.F04136 0.5kb upstream 0.5kb upstream 4527 true Chr06: 52034225-52038751 Eucalyptus grandis
Eucgr.F04136 0.5kb upstream 0.5kb upstream 500 false Chr06: 52038252-52038751 Eucalyptus grandis
Eucgr.F04136 0.5kb downstream 0.5kb downstream 4527 true Chr06: 52033725-52038251 Eucalyptus grandis
Eucgr.F04136 0.5kb downstream 0.5kb downstream 500 false Chr06: 52033725-52034224 Eucalyptus grandis
Eucgr.F04136 1.0kb upstream 1.0kb upstream 5027 true Chr06: 52034225-52039251 Eucalyptus grandis
Eucgr.F04136 1.0kb upstream 1.0kb upstream 1000 false Chr06: 52038252-52039251 Eucalyptus grandis
Eucgr.F04136 1.0kb downstream 1.0kb downstream 5027 true Chr06: 52033225-52038251 Eucalyptus grandis
Eucgr.F04136 1.0kb downstream 1.0kb downstream 1000 false Chr06: 52033225-52034224 Eucalyptus grandis
Eucgr.F04136 2.0kb upstream 2.0kb upstream 6027 true Chr06: 52034225-52040251 Eucalyptus grandis
Eucgr.F04136 2.0kb upstream 2.0kb upstream 2000 false Chr06: 52038252-52040251 Eucalyptus grandis
Eucgr.F04136 2.0kb downstream 2.0kb downstream 6027 true Chr06: 52032225-52038251 Eucalyptus grandis
Eucgr.F04136 2.0kb downstream 2.0kb downstream 2000 false Chr06: 52032225-52034224 Eucalyptus grandis
Eucgr.F04136 5.0kb upstream 5.0kb upstream 9027 true Chr06: 52034225-52043251 Eucalyptus grandis
Eucgr.F04136 5.0kb upstream 5.0kb upstream 5000 false Chr06: 52038252-52043251 Eucalyptus grandis
Eucgr.F04136 5.0kb downstream 5.0kb downstream 9027 true Chr06: 52029225-52038251 Eucalyptus grandis
Eucgr.F04136 5.0kb downstream 5.0kb downstream 5000 false Chr06: 52029225-52034224 Eucalyptus grandis
Eucgr.F04136 10.0kb upstream 10.0kb upstream 14027 true Chr06: 52034225-52048251 Eucalyptus grandis
Eucgr.F04136 10.0kb upstream 10.0kb upstream 10000 false Chr06: 52038252-52048251 Eucalyptus grandis
Eucgr.F04136 10.0kb downstream 10.0kb downstream 14027 true Chr06: 52024225-52038251 Eucalyptus grandis
Eucgr.F04136 10.0kb downstream 10.0kb downstream 10000 false Chr06: 52024225-52034224 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064626 5270 Rosid View MSA
123738395 5271 Pentapetalae View MSA
122787911 5272 Eudicot View MSA
122046427 5273 Angiosperm View MSA
121346161 5274 Embryophyte View MSA
123424935 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.1129 0.0 30.9345    
cufflinks 32.6936 0.0 72.7254    
cufflinks 12.2491 0.0 29.0143    
cufflinks 36.5317 0.0 81.0341   High
cufflinks 22.2397 0.0 50.4053    
cufflinks 6.32723 0.0 16.0516   Low

0 Strain