Gene : Eucgr.G00556 E. grandis v2.0
Defline:  (1 of 2) PTHR10799:SF741 - HELICASE PROTEIN MOM1-RELATED Genomic Order:  300
Name:  ? Eucgr.G00556 Secondary Identifier:  ? PAC:32071209
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00556 0.5kb upstream 0.5kb upstream 22593 true Chr07: 8263948-8286540 Eucalyptus grandis
Eucgr.G00556 0.5kb upstream 0.5kb upstream 500 false Chr07: 8263948-8264447 Eucalyptus grandis
Eucgr.G00556 0.5kb downstream 0.5kb downstream 22593 true Chr07: 8264448-8287040 Eucalyptus grandis
Eucgr.G00556 0.5kb downstream 0.5kb downstream 500 false Chr07: 8286541-8287040 Eucalyptus grandis
Eucgr.G00556 1.0kb upstream 1.0kb upstream 23093 true Chr07: 8263448-8286540 Eucalyptus grandis
Eucgr.G00556 1.0kb upstream 1.0kb upstream 1000 false Chr07: 8263448-8264447 Eucalyptus grandis
Eucgr.G00556 1.0kb downstream 1.0kb downstream 23093 true Chr07: 8264448-8287540 Eucalyptus grandis
Eucgr.G00556 1.0kb downstream 1.0kb downstream 1000 false Chr07: 8286541-8287540 Eucalyptus grandis
Eucgr.G00556 2.0kb upstream 2.0kb upstream 24093 true Chr07: 8262448-8286540 Eucalyptus grandis
Eucgr.G00556 2.0kb upstream 2.0kb upstream 2000 false Chr07: 8262448-8264447 Eucalyptus grandis
Eucgr.G00556 2.0kb downstream 2.0kb downstream 24093 true Chr07: 8264448-8288540 Eucalyptus grandis
Eucgr.G00556 2.0kb downstream 2.0kb downstream 2000 false Chr07: 8286541-8288540 Eucalyptus grandis
Eucgr.G00556 5.0kb upstream 5.0kb upstream 27093 true Chr07: 8259448-8286540 Eucalyptus grandis
Eucgr.G00556 5.0kb upstream 5.0kb upstream 5000 false Chr07: 8259448-8264447 Eucalyptus grandis
Eucgr.G00556 5.0kb downstream 5.0kb downstream 27093 true Chr07: 8264448-8291540 Eucalyptus grandis
Eucgr.G00556 5.0kb downstream 5.0kb downstream 5000 false Chr07: 8286541-8291540 Eucalyptus grandis
Eucgr.G00556 10.0kb upstream 10.0kb upstream 32093 true Chr07: 8254448-8286540 Eucalyptus grandis
Eucgr.G00556 10.0kb upstream 10.0kb upstream 10000 false Chr07: 8254448-8264447 Eucalyptus grandis
Eucgr.G00556 10.0kb downstream 10.0kb downstream 32093 true Chr07: 8264448-8296540 Eucalyptus grandis
Eucgr.G00556 10.0kb downstream 10.0kb downstream 10000 false Chr07: 8286541-8296540 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067543 5270 Rosid View MSA
123739750 5271 Pentapetalae View MSA
122789120 5272 Eudicot View MSA
122051163 5273 Angiosperm View MSA
121347605 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.2904 0.0 32.875    
cufflinks 13.1761 0.0 34.8748    
cufflinks 13.4618 0.0 38.1778    
cufflinks 10.9275 0.0 27.6712    
cufflinks 8.34132 0.0 22.3376   Low
cufflinks 10.2812 0.0 23.3123    

0 Strain