Gene : Eucgr.G00449 E. grandis v2.0
Defline:  (1 of 3) PTHR10048:SF15 - PHOSPHATIDYLINOSITOL 4-KINASE ALPHA-LIKE PROTEIN P2-RELATED Genomic Order:  1239
Name:  ? Eucgr.G00449 Secondary Identifier:  ? PAC:32073238
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6351 Eucalyptus grandis pathologic  
Egrandis PWY-6352 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00449 0.5kb upstream 0.5kb upstream 7072 true Chr07: 29959614-29966685 Eucalyptus grandis
Eucgr.G00449 0.5kb upstream 0.5kb upstream 500 false Chr07: 29966186-29966685 Eucalyptus grandis
Eucgr.G00449 0.5kb downstream 0.5kb downstream 7072 true Chr07: 29959114-29966185 Eucalyptus grandis
Eucgr.G00449 0.5kb downstream 0.5kb downstream 500 false Chr07: 29959114-29959613 Eucalyptus grandis
Eucgr.G00449 1.0kb upstream 1.0kb upstream 7572 true Chr07: 29959614-29967185 Eucalyptus grandis
Eucgr.G00449 1.0kb upstream 1.0kb upstream 1000 false Chr07: 29966186-29967185 Eucalyptus grandis
Eucgr.G00449 1.0kb downstream 1.0kb downstream 7572 true Chr07: 29958614-29966185 Eucalyptus grandis
Eucgr.G00449 1.0kb downstream 1.0kb downstream 1000 false Chr07: 29958614-29959613 Eucalyptus grandis
Eucgr.G00449 2.0kb upstream 2.0kb upstream 8572 true Chr07: 29959614-29968185 Eucalyptus grandis
Eucgr.G00449 2.0kb upstream 2.0kb upstream 2000 false Chr07: 29966186-29968185 Eucalyptus grandis
Eucgr.G00449 2.0kb downstream 2.0kb downstream 8572 true Chr07: 29957614-29966185 Eucalyptus grandis
Eucgr.G00449 2.0kb downstream 2.0kb downstream 2000 false Chr07: 29957614-29959613 Eucalyptus grandis
Eucgr.G00449 5.0kb upstream 5.0kb upstream 11572 true Chr07: 29959614-29971185 Eucalyptus grandis
Eucgr.G00449 5.0kb upstream 5.0kb upstream 5000 false Chr07: 29966186-29971185 Eucalyptus grandis
Eucgr.G00449 5.0kb downstream 5.0kb downstream 11572 true Chr07: 29954614-29966185 Eucalyptus grandis
Eucgr.G00449 5.0kb downstream 5.0kb downstream 5000 false Chr07: 29954614-29959613 Eucalyptus grandis
Eucgr.G00449 10.0kb upstream 10.0kb upstream 16572 true Chr07: 29959614-29976185 Eucalyptus grandis
Eucgr.G00449 10.0kb upstream 10.0kb upstream 10000 false Chr07: 29966186-29976185 Eucalyptus grandis
Eucgr.G00449 10.0kb downstream 10.0kb downstream 16572 true Chr07: 29949614-29966185 Eucalyptus grandis
Eucgr.G00449 10.0kb downstream 10.0kb downstream 10000 false Chr07: 29949614-29959613 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027409 5273 Angiosperm View MSA
124050415 5270 Rosid View MSA
123619795 5271 Pentapetalae View MSA
122654231 5272 Eudicot View MSA
121297066 5274 Embryophyte View MSA
123335161 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.0696 0.0 20.9868    
cufflinks 12.1823 0.0 27.5721   High
cufflinks 11.2311 0.0 25.5586    
cufflinks 4.98163 0.0 12.1039   Low
cufflinks 8.57544 0.0 19.9282    
cufflinks 7.43179 0.0 17.5166    

0 Strain