Gene : Eucgr.G00780 E. grandis v2.0
Defline:  (1 of 1) PTHR10992:SF742 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  482
Name:  ? Eucgr.G00780 Secondary Identifier:  ? PAC:32073062
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LIPAS-PWY Eucalyptus grandis pathologic  
Egrandis PWY-7420 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G00780 0.5kb upstream 0.5kb upstream 2289 true Chr07: 11852924-11855212 Eucalyptus grandis
Eucgr.G00780 0.5kb upstream 0.5kb upstream 500 false Chr07: 11852924-11853423 Eucalyptus grandis
Eucgr.G00780 0.5kb downstream 0.5kb downstream 2289 true Chr07: 11853424-11855712 Eucalyptus grandis
Eucgr.G00780 0.5kb downstream 0.5kb downstream 500 false Chr07: 11855213-11855712 Eucalyptus grandis
Eucgr.G00780 1.0kb upstream 1.0kb upstream 2789 true Chr07: 11852424-11855212 Eucalyptus grandis
Eucgr.G00780 1.0kb upstream 1.0kb upstream 1000 false Chr07: 11852424-11853423 Eucalyptus grandis
Eucgr.G00780 1.0kb downstream 1.0kb downstream 2789 true Chr07: 11853424-11856212 Eucalyptus grandis
Eucgr.G00780 1.0kb downstream 1.0kb downstream 1000 false Chr07: 11855213-11856212 Eucalyptus grandis
Eucgr.G00780 2.0kb upstream 2.0kb upstream 3789 true Chr07: 11851424-11855212 Eucalyptus grandis
Eucgr.G00780 2.0kb upstream 2.0kb upstream 2000 false Chr07: 11851424-11853423 Eucalyptus grandis
Eucgr.G00780 2.0kb downstream 2.0kb downstream 3789 true Chr07: 11853424-11857212 Eucalyptus grandis
Eucgr.G00780 2.0kb downstream 2.0kb downstream 2000 false Chr07: 11855213-11857212 Eucalyptus grandis
Eucgr.G00780 5.0kb upstream 5.0kb upstream 6789 true Chr07: 11848424-11855212 Eucalyptus grandis
Eucgr.G00780 5.0kb upstream 5.0kb upstream 5000 false Chr07: 11848424-11853423 Eucalyptus grandis
Eucgr.G00780 5.0kb downstream 5.0kb downstream 6789 true Chr07: 11853424-11860212 Eucalyptus grandis
Eucgr.G00780 5.0kb downstream 5.0kb downstream 5000 false Chr07: 11855213-11860212 Eucalyptus grandis
Eucgr.G00780 10.0kb upstream 10.0kb upstream 11789 true Chr07: 11843424-11855212 Eucalyptus grandis
Eucgr.G00780 10.0kb upstream 10.0kb upstream 10000 false Chr07: 11843424-11853423 Eucalyptus grandis
Eucgr.G00780 10.0kb downstream 10.0kb downstream 11789 true Chr07: 11853424-11865212 Eucalyptus grandis
Eucgr.G00780 10.0kb downstream 10.0kb downstream 10000 false Chr07: 11855213-11865212 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063278 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.531467 0.0 1.81069    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain