Gene : Eucgr.G01771 E. grandis v2.0
Defline:  (1 of 235) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1371
Name:  ? Eucgr.G01771 Secondary Identifier:  ? PAC:32073310
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01771 0.5kb upstream 0.5kb upstream 1955 true Chr07: 34056795-34058749 Eucalyptus grandis
Eucgr.G01771 0.5kb upstream 0.5kb upstream 500 false Chr07: 34058250-34058749 Eucalyptus grandis
Eucgr.G01771 0.5kb downstream 0.5kb downstream 1955 true Chr07: 34056295-34058249 Eucalyptus grandis
Eucgr.G01771 0.5kb downstream 0.5kb downstream 500 false Chr07: 34056295-34056794 Eucalyptus grandis
Eucgr.G01771 1.0kb upstream 1.0kb upstream 2455 true Chr07: 34056795-34059249 Eucalyptus grandis
Eucgr.G01771 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34058250-34059249 Eucalyptus grandis
Eucgr.G01771 1.0kb downstream 1.0kb downstream 2455 true Chr07: 34055795-34058249 Eucalyptus grandis
Eucgr.G01771 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34055795-34056794 Eucalyptus grandis
Eucgr.G01771 2.0kb upstream 2.0kb upstream 3455 true Chr07: 34056795-34060249 Eucalyptus grandis
Eucgr.G01771 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34058250-34060249 Eucalyptus grandis
Eucgr.G01771 2.0kb downstream 2.0kb downstream 3455 true Chr07: 34054795-34058249 Eucalyptus grandis
Eucgr.G01771 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34054795-34056794 Eucalyptus grandis
Eucgr.G01771 5.0kb upstream 5.0kb upstream 6455 true Chr07: 34056795-34063249 Eucalyptus grandis
Eucgr.G01771 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34058250-34063249 Eucalyptus grandis
Eucgr.G01771 5.0kb downstream 5.0kb downstream 6455 true Chr07: 34051795-34058249 Eucalyptus grandis
Eucgr.G01771 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34051795-34056794 Eucalyptus grandis
Eucgr.G01771 10.0kb upstream 10.0kb upstream 11455 true Chr07: 34056795-34068249 Eucalyptus grandis
Eucgr.G01771 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34058250-34068249 Eucalyptus grandis
Eucgr.G01771 10.0kb downstream 10.0kb downstream 11455 true Chr07: 34046795-34058249 Eucalyptus grandis
Eucgr.G01771 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34046795-34056794 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073519 5270 Rosid View MSA
123739768 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.161597 0.0 0.604252 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.743658 0.0 2.28578    
cufflinks 1.42554 0.0 4.07033    
cufflinks 1.41178 0.0 4.03642    
cufflinks 0.484546 0.0 1.55833 Low  

0 Strain