Gene : Eucgr.G01740 E. grandis v2.0
Defline:  (1 of 1) 1.3.1.89 - tRNA-dihydrouridine(47) synthase (NAD(P)(+)) / tRNA-dihydrouridine synthase 3 Genomic Order:  1342
Name:  ? Eucgr.G01740 Secondary Identifier:  ? PAC:32070770
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01740 0.5kb upstream 0.5kb upstream 5240 true Chr07: 33505130-33510369 Eucalyptus grandis
Eucgr.G01740 0.5kb upstream 0.5kb upstream 500 false Chr07: 33505130-33505629 Eucalyptus grandis
Eucgr.G01740 0.5kb downstream 0.5kb downstream 5240 true Chr07: 33505630-33510869 Eucalyptus grandis
Eucgr.G01740 0.5kb downstream 0.5kb downstream 500 false Chr07: 33510370-33510869 Eucalyptus grandis
Eucgr.G01740 1.0kb upstream 1.0kb upstream 5740 true Chr07: 33504630-33510369 Eucalyptus grandis
Eucgr.G01740 1.0kb upstream 1.0kb upstream 1000 false Chr07: 33504630-33505629 Eucalyptus grandis
Eucgr.G01740 1.0kb downstream 1.0kb downstream 5740 true Chr07: 33505630-33511369 Eucalyptus grandis
Eucgr.G01740 1.0kb downstream 1.0kb downstream 1000 false Chr07: 33510370-33511369 Eucalyptus grandis
Eucgr.G01740 2.0kb upstream 2.0kb upstream 6740 true Chr07: 33503630-33510369 Eucalyptus grandis
Eucgr.G01740 2.0kb upstream 2.0kb upstream 2000 false Chr07: 33503630-33505629 Eucalyptus grandis
Eucgr.G01740 2.0kb downstream 2.0kb downstream 6740 true Chr07: 33505630-33512369 Eucalyptus grandis
Eucgr.G01740 2.0kb downstream 2.0kb downstream 2000 false Chr07: 33510370-33512369 Eucalyptus grandis
Eucgr.G01740 5.0kb upstream 5.0kb upstream 9740 true Chr07: 33500630-33510369 Eucalyptus grandis
Eucgr.G01740 5.0kb upstream 5.0kb upstream 5000 false Chr07: 33500630-33505629 Eucalyptus grandis
Eucgr.G01740 5.0kb downstream 5.0kb downstream 9740 true Chr07: 33505630-33515369 Eucalyptus grandis
Eucgr.G01740 5.0kb downstream 5.0kb downstream 5000 false Chr07: 33510370-33515369 Eucalyptus grandis
Eucgr.G01740 10.0kb upstream 10.0kb upstream 14740 true Chr07: 33495630-33510369 Eucalyptus grandis
Eucgr.G01740 10.0kb upstream 10.0kb upstream 10000 false Chr07: 33495630-33505629 Eucalyptus grandis
Eucgr.G01740 10.0kb downstream 10.0kb downstream 14740 true Chr07: 33505630-33520369 Eucalyptus grandis
Eucgr.G01740 10.0kb downstream 10.0kb downstream 10000 false Chr07: 33510370-33520369 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062721 5270 Rosid View MSA
123739972 5271 Pentapetalae View MSA
122787852 5272 Eudicot View MSA
122047874 5273 Angiosperm View MSA
121343819 5274 Embryophyte View MSA
123428585 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9696 0.0 26.6076    
cufflinks 6.24903 0.0 14.2912    
cufflinks 13.698 0.0 30.3523    
cufflinks 3.67683 0.0 8.77754   Low
cufflinks 7.56664 0.0 17.1082    
cufflinks 13.3882 0.0 29.6976    

0 Strain