Gene : Eucgr.G01673 E. grandis v2.0
Defline:  (1 of 15) PTHR10992//PTHR10992:SF838 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Genomic Order:  1261
Name:  ? Eucgr.G01673 Secondary Identifier:  ? PAC:32073356
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis LIPAS-PWY Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01673 0.5kb upstream 0.5kb upstream 12873 true Chr07: 30658245-30671117 Eucalyptus grandis
Eucgr.G01673 0.5kb upstream 0.5kb upstream 500 false Chr07: 30670618-30671117 Eucalyptus grandis
Eucgr.G01673 0.5kb downstream 0.5kb downstream 12873 true Chr07: 30657745-30670617 Eucalyptus grandis
Eucgr.G01673 0.5kb downstream 0.5kb downstream 500 false Chr07: 30657745-30658244 Eucalyptus grandis
Eucgr.G01673 1.0kb upstream 1.0kb upstream 13373 true Chr07: 30658245-30671617 Eucalyptus grandis
Eucgr.G01673 1.0kb upstream 1.0kb upstream 1000 false Chr07: 30670618-30671617 Eucalyptus grandis
Eucgr.G01673 1.0kb downstream 1.0kb downstream 13373 true Chr07: 30657245-30670617 Eucalyptus grandis
Eucgr.G01673 1.0kb downstream 1.0kb downstream 1000 false Chr07: 30657245-30658244 Eucalyptus grandis
Eucgr.G01673 2.0kb upstream 2.0kb upstream 14373 true Chr07: 30658245-30672617 Eucalyptus grandis
Eucgr.G01673 2.0kb upstream 2.0kb upstream 2000 false Chr07: 30670618-30672617 Eucalyptus grandis
Eucgr.G01673 2.0kb downstream 2.0kb downstream 14373 true Chr07: 30656245-30670617 Eucalyptus grandis
Eucgr.G01673 2.0kb downstream 2.0kb downstream 2000 false Chr07: 30656245-30658244 Eucalyptus grandis
Eucgr.G01673 5.0kb upstream 5.0kb upstream 17373 true Chr07: 30658245-30675617 Eucalyptus grandis
Eucgr.G01673 5.0kb upstream 5.0kb upstream 5000 false Chr07: 30670618-30675617 Eucalyptus grandis
Eucgr.G01673 5.0kb downstream 5.0kb downstream 17373 true Chr07: 30653245-30670617 Eucalyptus grandis
Eucgr.G01673 5.0kb downstream 5.0kb downstream 5000 false Chr07: 30653245-30658244 Eucalyptus grandis
Eucgr.G01673 10.0kb upstream 10.0kb upstream 22373 true Chr07: 30658245-30680617 Eucalyptus grandis
Eucgr.G01673 10.0kb upstream 10.0kb upstream 10000 false Chr07: 30670618-30680617 Eucalyptus grandis
Eucgr.G01673 10.0kb downstream 10.0kb downstream 22373 true Chr07: 30648245-30670617 Eucalyptus grandis
Eucgr.G01673 10.0kb downstream 10.0kb downstream 10000 false Chr07: 30648245-30658244 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124071843 5270 Rosid View MSA
123749753 5271 Pentapetalae View MSA
122790165 5272 Eudicot View MSA
122050369 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121351643 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.152489 0.0 0.600732 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.907008 0.0 2.80789    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain