Gene : Eucgr.G01271 E. grandis v2.0
Defline:  (1 of 2) PTHR11785//PTHR11785:SF355 - AMINO ACID TRANSPORTER Genomic Order:  856
Name:  ? Eucgr.G01271 Secondary Identifier:  ? PAC:32073425
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01271 0.5kb upstream 0.5kb upstream 3976 true Chr07: 19586351-19590326 Eucalyptus grandis
Eucgr.G01271 0.5kb upstream 0.5kb upstream 500 false Chr07: 19586351-19586850 Eucalyptus grandis
Eucgr.G01271 0.5kb downstream 0.5kb downstream 3976 true Chr07: 19586851-19590826 Eucalyptus grandis
Eucgr.G01271 0.5kb downstream 0.5kb downstream 500 false Chr07: 19590327-19590826 Eucalyptus grandis
Eucgr.G01271 1.0kb upstream 1.0kb upstream 4476 true Chr07: 19585851-19590326 Eucalyptus grandis
Eucgr.G01271 1.0kb upstream 1.0kb upstream 1000 false Chr07: 19585851-19586850 Eucalyptus grandis
Eucgr.G01271 1.0kb downstream 1.0kb downstream 4476 true Chr07: 19586851-19591326 Eucalyptus grandis
Eucgr.G01271 1.0kb downstream 1.0kb downstream 1000 false Chr07: 19590327-19591326 Eucalyptus grandis
Eucgr.G01271 2.0kb upstream 2.0kb upstream 5476 true Chr07: 19584851-19590326 Eucalyptus grandis
Eucgr.G01271 2.0kb upstream 2.0kb upstream 2000 false Chr07: 19584851-19586850 Eucalyptus grandis
Eucgr.G01271 2.0kb downstream 2.0kb downstream 5476 true Chr07: 19586851-19592326 Eucalyptus grandis
Eucgr.G01271 2.0kb downstream 2.0kb downstream 2000 false Chr07: 19590327-19592326 Eucalyptus grandis
Eucgr.G01271 5.0kb upstream 5.0kb upstream 8476 true Chr07: 19581851-19590326 Eucalyptus grandis
Eucgr.G01271 5.0kb upstream 5.0kb upstream 5000 false Chr07: 19581851-19586850 Eucalyptus grandis
Eucgr.G01271 5.0kb downstream 5.0kb downstream 8476 true Chr07: 19586851-19595326 Eucalyptus grandis
Eucgr.G01271 5.0kb downstream 5.0kb downstream 5000 false Chr07: 19590327-19595326 Eucalyptus grandis
Eucgr.G01271 10.0kb upstream 10.0kb upstream 13476 true Chr07: 19576851-19590326 Eucalyptus grandis
Eucgr.G01271 10.0kb upstream 10.0kb upstream 10000 false Chr07: 19576851-19586850 Eucalyptus grandis
Eucgr.G01271 10.0kb downstream 10.0kb downstream 13476 true Chr07: 19586851-19600326 Eucalyptus grandis
Eucgr.G01271 10.0kb downstream 10.0kb downstream 10000 false Chr07: 19590327-19600326 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068047 5270 Rosid View MSA
123738563 5271 Pentapetalae View MSA
122792232 5272 Eudicot View MSA
122042017 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.34851 0.0 10.5525    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.06539 0.0 9.91892    
cufflinks 0.273572 0.0 0.889754 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 8.5602 0.0 19.6153    

0 Strain