Gene : Eucgr.G01214 E. grandis v2.0
Defline:  (1 of 8) PTHR31490:SF18 - 1,4-BETA-XYLAN ENDOHYDROLASE-RELATED Genomic Order:  812
Name:  ? Eucgr.G01214 Secondary Identifier:  ? PAC:32073475
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01214 0.5kb upstream 0.5kb upstream 4348 true Chr07: 18771048-18775395 Eucalyptus grandis
Eucgr.G01214 0.5kb upstream 0.5kb upstream 500 false Chr07: 18774896-18775395 Eucalyptus grandis
Eucgr.G01214 0.5kb downstream 0.5kb downstream 4348 true Chr07: 18770548-18774895 Eucalyptus grandis
Eucgr.G01214 0.5kb downstream 0.5kb downstream 500 false Chr07: 18770548-18771047 Eucalyptus grandis
Eucgr.G01214 1.0kb upstream 1.0kb upstream 4848 true Chr07: 18771048-18775895 Eucalyptus grandis
Eucgr.G01214 1.0kb upstream 1.0kb upstream 1000 false Chr07: 18774896-18775895 Eucalyptus grandis
Eucgr.G01214 1.0kb downstream 1.0kb downstream 4848 true Chr07: 18770048-18774895 Eucalyptus grandis
Eucgr.G01214 1.0kb downstream 1.0kb downstream 1000 false Chr07: 18770048-18771047 Eucalyptus grandis
Eucgr.G01214 2.0kb upstream 2.0kb upstream 5848 true Chr07: 18771048-18776895 Eucalyptus grandis
Eucgr.G01214 2.0kb upstream 2.0kb upstream 2000 false Chr07: 18774896-18776895 Eucalyptus grandis
Eucgr.G01214 2.0kb downstream 2.0kb downstream 5848 true Chr07: 18769048-18774895 Eucalyptus grandis
Eucgr.G01214 2.0kb downstream 2.0kb downstream 2000 false Chr07: 18769048-18771047 Eucalyptus grandis
Eucgr.G01214 5.0kb upstream 5.0kb upstream 8848 true Chr07: 18771048-18779895 Eucalyptus grandis
Eucgr.G01214 5.0kb upstream 5.0kb upstream 5000 false Chr07: 18774896-18779895 Eucalyptus grandis
Eucgr.G01214 5.0kb downstream 5.0kb downstream 8848 true Chr07: 18766048-18774895 Eucalyptus grandis
Eucgr.G01214 5.0kb downstream 5.0kb downstream 5000 false Chr07: 18766048-18771047 Eucalyptus grandis
Eucgr.G01214 10.0kb upstream 10.0kb upstream 13848 true Chr07: 18771048-18784895 Eucalyptus grandis
Eucgr.G01214 10.0kb upstream 10.0kb upstream 10000 false Chr07: 18774896-18784895 Eucalyptus grandis
Eucgr.G01214 10.0kb downstream 10.0kb downstream 13848 true Chr07: 18761048-18774895 Eucalyptus grandis
Eucgr.G01214 10.0kb downstream 10.0kb downstream 10000 false Chr07: 18761048-18771047 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074050 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.25448 0.0 12.285    
cufflinks 0.751715 0.0 2.12412 Low  
cufflinks 6.81178 0.0 15.5882    
cufflinks 1.1262 0.0 3.04813    
cufflinks 0.179506 0.0 0.602194 Low Low
cufflinks 5.56291 0.0 12.9536    

0 Strain