Gene : Eucgr.G02041 E. grandis v2.0
Defline:  (1 of 1) PTHR23084:SF119 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 Genomic Order:  1625
Name:  ? Eucgr.G02041 Secondary Identifier:  ? PAC:32071130
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02041 0.5kb upstream 0.5kb upstream 10851 true Chr07: 39720480-39731330 Eucalyptus grandis
Eucgr.G02041 0.5kb upstream 0.5kb upstream 500 false Chr07: 39720480-39720979 Eucalyptus grandis
Eucgr.G02041 0.5kb downstream 0.5kb downstream 10851 true Chr07: 39720980-39731830 Eucalyptus grandis
Eucgr.G02041 0.5kb downstream 0.5kb downstream 500 false Chr07: 39731331-39731830 Eucalyptus grandis
Eucgr.G02041 1.0kb upstream 1.0kb upstream 11351 true Chr07: 39719980-39731330 Eucalyptus grandis
Eucgr.G02041 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39719980-39720979 Eucalyptus grandis
Eucgr.G02041 1.0kb downstream 1.0kb downstream 11351 true Chr07: 39720980-39732330 Eucalyptus grandis
Eucgr.G02041 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39731331-39732330 Eucalyptus grandis
Eucgr.G02041 2.0kb upstream 2.0kb upstream 12351 true Chr07: 39718980-39731330 Eucalyptus grandis
Eucgr.G02041 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39718980-39720979 Eucalyptus grandis
Eucgr.G02041 2.0kb downstream 2.0kb downstream 12351 true Chr07: 39720980-39733330 Eucalyptus grandis
Eucgr.G02041 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39731331-39733330 Eucalyptus grandis
Eucgr.G02041 5.0kb upstream 5.0kb upstream 15351 true Chr07: 39715980-39731330 Eucalyptus grandis
Eucgr.G02041 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39715980-39720979 Eucalyptus grandis
Eucgr.G02041 5.0kb downstream 5.0kb downstream 15351 true Chr07: 39720980-39736330 Eucalyptus grandis
Eucgr.G02041 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39731331-39736330 Eucalyptus grandis
Eucgr.G02041 10.0kb upstream 10.0kb upstream 20351 true Chr07: 39710980-39731330 Eucalyptus grandis
Eucgr.G02041 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39710980-39720979 Eucalyptus grandis
Eucgr.G02041 10.0kb downstream 10.0kb downstream 20351 true Chr07: 39720980-39741330 Eucalyptus grandis
Eucgr.G02041 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39731331-39741330 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066570 5270 Rosid View MSA
123740102 5271 Pentapetalae View MSA
122787208 5272 Eudicot View MSA
122045531 5273 Angiosperm View MSA
121346964 5274 Embryophyte View MSA
123427675 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.10831 0.0 9.70698    
cufflinks 1.24727 0.0 3.29576   Low
cufflinks 3.19608 0.0 7.70293    
cufflinks 1.2586 0.0 3.31673   Low
cufflinks 2.67101 0.0 6.56687    
cufflinks 6.02416 0.0 13.8415   High

0 Strain