Gene : Eucgr.G02043 E. grandis v2.0
Defline:  (1 of 2) 2.1.1.11 - Magnesium protoporphyrin IX methyltransferase / S-adenosylmethioninemagnesium protoporphyrin methyltransferase Genomic Order:  1627
Name:  ? Eucgr.G02043 Secondary Identifier:  ? PAC:32073289
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis CHLOROPHYLL-SYN Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02043 0.5kb upstream 0.5kb upstream 2609 true Chr07: 39743882-39746490 Eucalyptus grandis
Eucgr.G02043 0.5kb upstream 0.5kb upstream 500 false Chr07: 39745991-39746490 Eucalyptus grandis
Eucgr.G02043 0.5kb downstream 0.5kb downstream 2609 true Chr07: 39743382-39745990 Eucalyptus grandis
Eucgr.G02043 0.5kb downstream 0.5kb downstream 500 false Chr07: 39743382-39743881 Eucalyptus grandis
Eucgr.G02043 1.0kb upstream 1.0kb upstream 3109 true Chr07: 39743882-39746990 Eucalyptus grandis
Eucgr.G02043 1.0kb upstream 1.0kb upstream 1000 false Chr07: 39745991-39746990 Eucalyptus grandis
Eucgr.G02043 1.0kb downstream 1.0kb downstream 3109 true Chr07: 39742882-39745990 Eucalyptus grandis
Eucgr.G02043 1.0kb downstream 1.0kb downstream 1000 false Chr07: 39742882-39743881 Eucalyptus grandis
Eucgr.G02043 2.0kb upstream 2.0kb upstream 4109 true Chr07: 39743882-39747990 Eucalyptus grandis
Eucgr.G02043 2.0kb upstream 2.0kb upstream 2000 false Chr07: 39745991-39747990 Eucalyptus grandis
Eucgr.G02043 2.0kb downstream 2.0kb downstream 4109 true Chr07: 39741882-39745990 Eucalyptus grandis
Eucgr.G02043 2.0kb downstream 2.0kb downstream 2000 false Chr07: 39741882-39743881 Eucalyptus grandis
Eucgr.G02043 5.0kb upstream 5.0kb upstream 7109 true Chr07: 39743882-39750990 Eucalyptus grandis
Eucgr.G02043 5.0kb upstream 5.0kb upstream 5000 false Chr07: 39745991-39750990 Eucalyptus grandis
Eucgr.G02043 5.0kb downstream 5.0kb downstream 7109 true Chr07: 39738882-39745990 Eucalyptus grandis
Eucgr.G02043 5.0kb downstream 5.0kb downstream 5000 false Chr07: 39738882-39743881 Eucalyptus grandis
Eucgr.G02043 10.0kb upstream 10.0kb upstream 12109 true Chr07: 39743882-39755990 Eucalyptus grandis
Eucgr.G02043 10.0kb upstream 10.0kb upstream 10000 false Chr07: 39745991-39755990 Eucalyptus grandis
Eucgr.G02043 10.0kb downstream 10.0kb downstream 12109 true Chr07: 39733882-39745990 Eucalyptus grandis
Eucgr.G02043 10.0kb downstream 10.0kb downstream 10000 false Chr07: 39733882-39743881 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063619 5270 Rosid View MSA
123739209 5271 Pentapetalae View MSA
122792870 5272 Eudicot View MSA
122043100 5273 Angiosperm View MSA
121345477 5274 Embryophyte View MSA
123424951 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.7437 0.0 57.8071    
cufflinks 0.821157 0.0 2.82292 Low  
cufflinks 11.3832 0.0 27.7757    
cufflinks 0.124459 0.0 0.696102 Low Low
cufflinks 0.290101 0.0 1.2005 Low  
cufflinks 84.6564 0.0 192.606 High High

0 Strain