Gene : Eucgr.G01978 E. grandis v2.0
Defline:  (1 of 4) 2.2.1.2 - Transaldolase / Glycerone transferase Genomic Order:  1575
Name:  ? Eucgr.G01978 Secondary Identifier:  ? PAC:32073005
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis NONOXIPENT-PWY Eucalyptus grandis pathologic  
Egrandis PENTOSE-P-PWY Eucalyptus grandis pathologic  
Egrandis PWY-5723 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01978 0.5kb upstream 0.5kb upstream 4698 true Chr07: 38200084-38204781 Eucalyptus grandis
Eucgr.G01978 0.5kb upstream 0.5kb upstream 500 false Chr07: 38200084-38200583 Eucalyptus grandis
Eucgr.G01978 0.5kb downstream 0.5kb downstream 4698 true Chr07: 38200584-38205281 Eucalyptus grandis
Eucgr.G01978 0.5kb downstream 0.5kb downstream 500 false Chr07: 38204782-38205281 Eucalyptus grandis
Eucgr.G01978 1.0kb upstream 1.0kb upstream 5198 true Chr07: 38199584-38204781 Eucalyptus grandis
Eucgr.G01978 1.0kb upstream 1.0kb upstream 1000 false Chr07: 38199584-38200583 Eucalyptus grandis
Eucgr.G01978 1.0kb downstream 1.0kb downstream 5198 true Chr07: 38200584-38205781 Eucalyptus grandis
Eucgr.G01978 1.0kb downstream 1.0kb downstream 1000 false Chr07: 38204782-38205781 Eucalyptus grandis
Eucgr.G01978 2.0kb upstream 2.0kb upstream 6198 true Chr07: 38198584-38204781 Eucalyptus grandis
Eucgr.G01978 2.0kb upstream 2.0kb upstream 2000 false Chr07: 38198584-38200583 Eucalyptus grandis
Eucgr.G01978 2.0kb downstream 2.0kb downstream 6198 true Chr07: 38200584-38206781 Eucalyptus grandis
Eucgr.G01978 2.0kb downstream 2.0kb downstream 2000 false Chr07: 38204782-38206781 Eucalyptus grandis
Eucgr.G01978 5.0kb upstream 5.0kb upstream 9198 true Chr07: 38195584-38204781 Eucalyptus grandis
Eucgr.G01978 5.0kb upstream 5.0kb upstream 5000 false Chr07: 38195584-38200583 Eucalyptus grandis
Eucgr.G01978 5.0kb downstream 5.0kb downstream 9198 true Chr07: 38200584-38209781 Eucalyptus grandis
Eucgr.G01978 5.0kb downstream 5.0kb downstream 5000 false Chr07: 38204782-38209781 Eucalyptus grandis
Eucgr.G01978 10.0kb upstream 10.0kb upstream 14198 true Chr07: 38190584-38204781 Eucalyptus grandis
Eucgr.G01978 10.0kb upstream 10.0kb upstream 10000 false Chr07: 38190584-38200583 Eucalyptus grandis
Eucgr.G01978 10.0kb downstream 10.0kb downstream 14198 true Chr07: 38200584-38214781 Eucalyptus grandis
Eucgr.G01978 10.0kb downstream 10.0kb downstream 10000 false Chr07: 38204782-38214781 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064365 5270 Rosid View MSA
123743559 5271 Pentapetalae View MSA
122786857 5272 Eudicot View MSA
122044911 5273 Angiosperm View MSA
121343866 5274 Embryophyte View MSA
123379934 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.317 0.0 128.312 High  
cufflinks 458.083 0.0 1277.76 High High
cufflinks 54.6091 0.0 122.088 High  
cufflinks 225.861 0.0 567.648 High  
cufflinks 78.6665 0.0 179.139 High  
cufflinks 45.2078 0.0 100.397 High  

0 Strain