Gene : Eucgr.G01787 E. grandis v2.0
Defline:  (1 of 5) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  1386
Name:  ? Eucgr.G01787 Secondary Identifier:  ? PAC:32070671
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G01787 0.5kb upstream 0.5kb upstream 4387 true Chr07: 34420650-34425036 Eucalyptus grandis
Eucgr.G01787 0.5kb upstream 0.5kb upstream 500 false Chr07: 34424537-34425036 Eucalyptus grandis
Eucgr.G01787 0.5kb downstream 0.5kb downstream 4387 true Chr07: 34420150-34424536 Eucalyptus grandis
Eucgr.G01787 0.5kb downstream 0.5kb downstream 500 false Chr07: 34420150-34420649 Eucalyptus grandis
Eucgr.G01787 1.0kb upstream 1.0kb upstream 4887 true Chr07: 34420650-34425536 Eucalyptus grandis
Eucgr.G01787 1.0kb upstream 1.0kb upstream 1000 false Chr07: 34424537-34425536 Eucalyptus grandis
Eucgr.G01787 1.0kb downstream 1.0kb downstream 4887 true Chr07: 34419650-34424536 Eucalyptus grandis
Eucgr.G01787 1.0kb downstream 1.0kb downstream 1000 false Chr07: 34419650-34420649 Eucalyptus grandis
Eucgr.G01787 2.0kb upstream 2.0kb upstream 5887 true Chr07: 34420650-34426536 Eucalyptus grandis
Eucgr.G01787 2.0kb upstream 2.0kb upstream 2000 false Chr07: 34424537-34426536 Eucalyptus grandis
Eucgr.G01787 2.0kb downstream 2.0kb downstream 5887 true Chr07: 34418650-34424536 Eucalyptus grandis
Eucgr.G01787 2.0kb downstream 2.0kb downstream 2000 false Chr07: 34418650-34420649 Eucalyptus grandis
Eucgr.G01787 5.0kb upstream 5.0kb upstream 8887 true Chr07: 34420650-34429536 Eucalyptus grandis
Eucgr.G01787 5.0kb upstream 5.0kb upstream 5000 false Chr07: 34424537-34429536 Eucalyptus grandis
Eucgr.G01787 5.0kb downstream 5.0kb downstream 8887 true Chr07: 34415650-34424536 Eucalyptus grandis
Eucgr.G01787 5.0kb downstream 5.0kb downstream 5000 false Chr07: 34415650-34420649 Eucalyptus grandis
Eucgr.G01787 10.0kb upstream 10.0kb upstream 13887 true Chr07: 34420650-34434536 Eucalyptus grandis
Eucgr.G01787 10.0kb upstream 10.0kb upstream 10000 false Chr07: 34424537-34434536 Eucalyptus grandis
Eucgr.G01787 10.0kb downstream 10.0kb downstream 13887 true Chr07: 34410650-34424536 Eucalyptus grandis
Eucgr.G01787 10.0kb downstream 10.0kb downstream 10000 false Chr07: 34410650-34420649 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124066529 5270 Rosid View MSA
123749118 5271 Pentapetalae View MSA
122786274 5272 Eudicot View MSA
122047398 5273 Angiosperm View MSA
121344434 5274 Embryophyte View MSA
123428691 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.3644 0.0 28.8089    
cufflinks 11.9195 0.0 27.7624    
cufflinks 11.8594 0.0 27.7649    
cufflinks 9.41037 0.0 22.4264    
cufflinks 15.5497 0.0 35.613    
cufflinks 38.8562 0.0 85.9574 High High

0 Strain