Gene : Eucgr.G02573 E. grandis v2.0
Defline:  (1 of 2) PTHR11097:SF8 - EXOSOME COMPLEX COMPONENT RRP42 Genomic Order:  2091
Name:  ? Eucgr.G02573 Secondary Identifier:  ? PAC:32070823
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02573 0.5kb upstream 0.5kb upstream 3618 true Chr07: 46502198-46505815 Eucalyptus grandis
Eucgr.G02573 0.5kb upstream 0.5kb upstream 500 false Chr07: 46502198-46502697 Eucalyptus grandis
Eucgr.G02573 0.5kb downstream 0.5kb downstream 3618 true Chr07: 46502698-46506315 Eucalyptus grandis
Eucgr.G02573 0.5kb downstream 0.5kb downstream 500 false Chr07: 46505816-46506315 Eucalyptus grandis
Eucgr.G02573 1.0kb upstream 1.0kb upstream 4118 true Chr07: 46501698-46505815 Eucalyptus grandis
Eucgr.G02573 1.0kb upstream 1.0kb upstream 1000 false Chr07: 46501698-46502697 Eucalyptus grandis
Eucgr.G02573 1.0kb downstream 1.0kb downstream 4118 true Chr07: 46502698-46506815 Eucalyptus grandis
Eucgr.G02573 1.0kb downstream 1.0kb downstream 1000 false Chr07: 46505816-46506815 Eucalyptus grandis
Eucgr.G02573 2.0kb upstream 2.0kb upstream 5118 true Chr07: 46500698-46505815 Eucalyptus grandis
Eucgr.G02573 2.0kb upstream 2.0kb upstream 2000 false Chr07: 46500698-46502697 Eucalyptus grandis
Eucgr.G02573 2.0kb downstream 2.0kb downstream 5118 true Chr07: 46502698-46507815 Eucalyptus grandis
Eucgr.G02573 2.0kb downstream 2.0kb downstream 2000 false Chr07: 46505816-46507815 Eucalyptus grandis
Eucgr.G02573 5.0kb upstream 5.0kb upstream 8118 true Chr07: 46497698-46505815 Eucalyptus grandis
Eucgr.G02573 5.0kb upstream 5.0kb upstream 5000 false Chr07: 46497698-46502697 Eucalyptus grandis
Eucgr.G02573 5.0kb downstream 5.0kb downstream 8118 true Chr07: 46502698-46510815 Eucalyptus grandis
Eucgr.G02573 5.0kb downstream 5.0kb downstream 5000 false Chr07: 46505816-46510815 Eucalyptus grandis
Eucgr.G02573 10.0kb upstream 10.0kb upstream 13118 true Chr07: 46492698-46505815 Eucalyptus grandis
Eucgr.G02573 10.0kb upstream 10.0kb upstream 10000 false Chr07: 46492698-46502697 Eucalyptus grandis
Eucgr.G02573 10.0kb downstream 10.0kb downstream 13118 true Chr07: 46502698-46515815 Eucalyptus grandis
Eucgr.G02573 10.0kb downstream 10.0kb downstream 10000 false Chr07: 46505816-46515815 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064835 5270 Rosid View MSA
123739797 5271 Pentapetalae View MSA
122793133 5272 Eudicot View MSA
122044791 5273 Angiosperm View MSA
121345379 5274 Embryophyte View MSA
123428075 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2565 0.0 24.0888   High
cufflinks 5.59268 0.0 13.9115    
cufflinks 10.9281 0.0 25.5347   High
cufflinks 5.33831 0.0 13.3434    
cufflinks 6.04378 0.0 14.9454    
cufflinks 3.71602 0.0 9.66688   Low

0 Strain