Gene : Eucgr.G02299 E. grandis v2.0
Defline:  (1 of 3) PTHR14428 - NUCLEOLAR COMPLEX PROTEIN 3 Genomic Order:  1834
Name:  ? Eucgr.G02299 Secondary Identifier:  ? PAC:32070738
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02299 0.5kb upstream 0.5kb upstream 5255 true Chr07: 43616945-43622199 Eucalyptus grandis
Eucgr.G02299 0.5kb upstream 0.5kb upstream 500 false Chr07: 43621700-43622199 Eucalyptus grandis
Eucgr.G02299 0.5kb downstream 0.5kb downstream 5255 true Chr07: 43616445-43621699 Eucalyptus grandis
Eucgr.G02299 0.5kb downstream 0.5kb downstream 500 false Chr07: 43616445-43616944 Eucalyptus grandis
Eucgr.G02299 1.0kb upstream 1.0kb upstream 5755 true Chr07: 43616945-43622699 Eucalyptus grandis
Eucgr.G02299 1.0kb upstream 1.0kb upstream 1000 false Chr07: 43621700-43622699 Eucalyptus grandis
Eucgr.G02299 1.0kb downstream 1.0kb downstream 5755 true Chr07: 43615945-43621699 Eucalyptus grandis
Eucgr.G02299 1.0kb downstream 1.0kb downstream 1000 false Chr07: 43615945-43616944 Eucalyptus grandis
Eucgr.G02299 2.0kb upstream 2.0kb upstream 6755 true Chr07: 43616945-43623699 Eucalyptus grandis
Eucgr.G02299 2.0kb upstream 2.0kb upstream 2000 false Chr07: 43621700-43623699 Eucalyptus grandis
Eucgr.G02299 2.0kb downstream 2.0kb downstream 6755 true Chr07: 43614945-43621699 Eucalyptus grandis
Eucgr.G02299 2.0kb downstream 2.0kb downstream 2000 false Chr07: 43614945-43616944 Eucalyptus grandis
Eucgr.G02299 5.0kb upstream 5.0kb upstream 9755 true Chr07: 43616945-43626699 Eucalyptus grandis
Eucgr.G02299 5.0kb upstream 5.0kb upstream 5000 false Chr07: 43621700-43626699 Eucalyptus grandis
Eucgr.G02299 5.0kb downstream 5.0kb downstream 9755 true Chr07: 43611945-43621699 Eucalyptus grandis
Eucgr.G02299 5.0kb downstream 5.0kb downstream 5000 false Chr07: 43611945-43616944 Eucalyptus grandis
Eucgr.G02299 10.0kb upstream 10.0kb upstream 14755 true Chr07: 43616945-43631699 Eucalyptus grandis
Eucgr.G02299 10.0kb upstream 10.0kb upstream 10000 false Chr07: 43621700-43631699 Eucalyptus grandis
Eucgr.G02299 10.0kb downstream 10.0kb downstream 14755 true Chr07: 43606945-43621699 Eucalyptus grandis
Eucgr.G02299 10.0kb downstream 10.0kb downstream 10000 false Chr07: 43606945-43616944 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068176 5270 Rosid View MSA
123740562 5271 Pentapetalae View MSA
122786357 5272 Eudicot View MSA
122041726 5273 Angiosperm View MSA
121346572 5274 Embryophyte View MSA
123424637 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.55796 0.0 4.38401    
cufflinks 0.0586373 0.0 0.438117 Low Low
cufflinks 1.78343 0.0 4.84484   High
cufflinks 0.188768 0.0 0.789349 Low  
cufflinks 0.510715 0.0 1.76844 Low  
cufflinks 0.697352 0.0 2.32264 Low  

0 Strain