Gene : Eucgr.G02225 E. grandis v2.0
Defline:  (1 of 1) PTHR21396 - 39S RIBOSOMAL PROTEIN L43 Genomic Order:  1783
Name:  ? Eucgr.G02225 Secondary Identifier:  ? PAC:32073299
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02225 0.5kb upstream 0.5kb upstream 5295 true Chr07: 42370111-42375405 Eucalyptus grandis
Eucgr.G02225 0.5kb upstream 0.5kb upstream 500 false Chr07: 42370111-42370610 Eucalyptus grandis
Eucgr.G02225 0.5kb downstream 0.5kb downstream 5295 true Chr07: 42370611-42375905 Eucalyptus grandis
Eucgr.G02225 0.5kb downstream 0.5kb downstream 500 false Chr07: 42375406-42375905 Eucalyptus grandis
Eucgr.G02225 1.0kb upstream 1.0kb upstream 5795 true Chr07: 42369611-42375405 Eucalyptus grandis
Eucgr.G02225 1.0kb upstream 1.0kb upstream 1000 false Chr07: 42369611-42370610 Eucalyptus grandis
Eucgr.G02225 1.0kb downstream 1.0kb downstream 5795 true Chr07: 42370611-42376405 Eucalyptus grandis
Eucgr.G02225 1.0kb downstream 1.0kb downstream 1000 false Chr07: 42375406-42376405 Eucalyptus grandis
Eucgr.G02225 2.0kb upstream 2.0kb upstream 6795 true Chr07: 42368611-42375405 Eucalyptus grandis
Eucgr.G02225 2.0kb upstream 2.0kb upstream 2000 false Chr07: 42368611-42370610 Eucalyptus grandis
Eucgr.G02225 2.0kb downstream 2.0kb downstream 6795 true Chr07: 42370611-42377405 Eucalyptus grandis
Eucgr.G02225 2.0kb downstream 2.0kb downstream 2000 false Chr07: 42375406-42377405 Eucalyptus grandis
Eucgr.G02225 5.0kb upstream 5.0kb upstream 9795 true Chr07: 42365611-42375405 Eucalyptus grandis
Eucgr.G02225 5.0kb upstream 5.0kb upstream 5000 false Chr07: 42365611-42370610 Eucalyptus grandis
Eucgr.G02225 5.0kb downstream 5.0kb downstream 9795 true Chr07: 42370611-42380405 Eucalyptus grandis
Eucgr.G02225 5.0kb downstream 5.0kb downstream 5000 false Chr07: 42375406-42380405 Eucalyptus grandis
Eucgr.G02225 10.0kb upstream 10.0kb upstream 14795 true Chr07: 42360611-42375405 Eucalyptus grandis
Eucgr.G02225 10.0kb upstream 10.0kb upstream 10000 false Chr07: 42360611-42370610 Eucalyptus grandis
Eucgr.G02225 10.0kb downstream 10.0kb downstream 14795 true Chr07: 42370611-42385405 Eucalyptus grandis
Eucgr.G02225 10.0kb downstream 10.0kb downstream 10000 false Chr07: 42375406-42385405 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074566 5270 Rosid View MSA
123745726 5271 Pentapetalae View MSA
122791499 5272 Eudicot View MSA
122046587 5273 Angiosperm View MSA
121350203 5274 Embryophyte View MSA
123428774 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.6682 0.0 34.4015    
cufflinks 16.9834 0.0 39.2821    
cufflinks 16.652 0.0 38.5897    
cufflinks 18.4967 0.0 42.3919    
cufflinks 31.7075 0.0 70.7812   High
cufflinks 14.9379 0.0 35.0504    

0 Strain