Gene : Eucgr.G02956 E. grandis v2.0
Defline:  (1 of 4) PF00805 - Pentapeptide repeats (8 copies) (Pentapeptide) Genomic Order:  2440
Name:  ? Eucgr.G02956 Secondary Identifier:  ? PAC:32072804
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02956 0.5kb upstream 0.5kb upstream 3904 true Chr07: 50720663-50724566 Eucalyptus grandis
Eucgr.G02956 0.5kb upstream 0.5kb upstream 500 false Chr07: 50720663-50721162 Eucalyptus grandis
Eucgr.G02956 0.5kb downstream 0.5kb downstream 3904 true Chr07: 50721163-50725066 Eucalyptus grandis
Eucgr.G02956 0.5kb downstream 0.5kb downstream 500 false Chr07: 50724567-50725066 Eucalyptus grandis
Eucgr.G02956 1.0kb upstream 1.0kb upstream 4404 true Chr07: 50720163-50724566 Eucalyptus grandis
Eucgr.G02956 1.0kb upstream 1.0kb upstream 1000 false Chr07: 50720163-50721162 Eucalyptus grandis
Eucgr.G02956 1.0kb downstream 1.0kb downstream 4404 true Chr07: 50721163-50725566 Eucalyptus grandis
Eucgr.G02956 1.0kb downstream 1.0kb downstream 1000 false Chr07: 50724567-50725566 Eucalyptus grandis
Eucgr.G02956 2.0kb upstream 2.0kb upstream 5404 true Chr07: 50719163-50724566 Eucalyptus grandis
Eucgr.G02956 2.0kb upstream 2.0kb upstream 2000 false Chr07: 50719163-50721162 Eucalyptus grandis
Eucgr.G02956 2.0kb downstream 2.0kb downstream 5404 true Chr07: 50721163-50726566 Eucalyptus grandis
Eucgr.G02956 2.0kb downstream 2.0kb downstream 2000 false Chr07: 50724567-50726566 Eucalyptus grandis
Eucgr.G02956 5.0kb upstream 5.0kb upstream 8404 true Chr07: 50716163-50724566 Eucalyptus grandis
Eucgr.G02956 5.0kb upstream 5.0kb upstream 5000 false Chr07: 50716163-50721162 Eucalyptus grandis
Eucgr.G02956 5.0kb downstream 5.0kb downstream 8404 true Chr07: 50721163-50729566 Eucalyptus grandis
Eucgr.G02956 5.0kb downstream 5.0kb downstream 5000 false Chr07: 50724567-50729566 Eucalyptus grandis
Eucgr.G02956 10.0kb upstream 10.0kb upstream 13404 true Chr07: 50711163-50724566 Eucalyptus grandis
Eucgr.G02956 10.0kb upstream 10.0kb upstream 10000 false Chr07: 50711163-50721162 Eucalyptus grandis
Eucgr.G02956 10.0kb downstream 10.0kb downstream 13404 true Chr07: 50721163-50734566 Eucalyptus grandis
Eucgr.G02956 10.0kb downstream 10.0kb downstream 10000 false Chr07: 50724567-50734566 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068801 5270 Rosid View MSA
123737641 5271 Pentapetalae View MSA
122793224 5272 Eudicot View MSA
122045781 5273 Angiosperm View MSA
121346461 5274 Embryophyte View MSA
123426937 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.97994 0.0 23.9641    
cufflinks 1.20368 0.0 4.13766    
cufflinks 5.77041 0.0 14.9062    
cufflinks 0.551548 0.0 2.05141   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 38.6878 0.0 87.0607 High High

0 Strain