Gene : Eucgr.G02935 E. grandis v2.0
Defline:  (1 of 3) PTHR27001:SF191 - PROTEIN KINASE APK1A, CHLOROPLASTIC-RELATED Genomic Order:  2421
Name:  ? Eucgr.G02935 Secondary Identifier:  ? PAC:32070231
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02935 0.5kb upstream 0.5kb upstream 3649 true Chr07: 50555317-50558965 Eucalyptus grandis
Eucgr.G02935 0.5kb upstream 0.5kb upstream 500 false Chr07: 50555317-50555816 Eucalyptus grandis
Eucgr.G02935 0.5kb downstream 0.5kb downstream 3649 true Chr07: 50555817-50559465 Eucalyptus grandis
Eucgr.G02935 0.5kb downstream 0.5kb downstream 500 false Chr07: 50558966-50559465 Eucalyptus grandis
Eucgr.G02935 1.0kb upstream 1.0kb upstream 4149 true Chr07: 50554817-50558965 Eucalyptus grandis
Eucgr.G02935 1.0kb upstream 1.0kb upstream 1000 false Chr07: 50554817-50555816 Eucalyptus grandis
Eucgr.G02935 1.0kb downstream 1.0kb downstream 4149 true Chr07: 50555817-50559965 Eucalyptus grandis
Eucgr.G02935 1.0kb downstream 1.0kb downstream 1000 false Chr07: 50558966-50559965 Eucalyptus grandis
Eucgr.G02935 2.0kb upstream 2.0kb upstream 5149 true Chr07: 50553817-50558965 Eucalyptus grandis
Eucgr.G02935 2.0kb upstream 2.0kb upstream 2000 false Chr07: 50553817-50555816 Eucalyptus grandis
Eucgr.G02935 2.0kb downstream 2.0kb downstream 5149 true Chr07: 50555817-50560965 Eucalyptus grandis
Eucgr.G02935 2.0kb downstream 2.0kb downstream 2000 false Chr07: 50558966-50560965 Eucalyptus grandis
Eucgr.G02935 5.0kb upstream 5.0kb upstream 8149 true Chr07: 50550817-50558965 Eucalyptus grandis
Eucgr.G02935 5.0kb upstream 5.0kb upstream 5000 false Chr07: 50550817-50555816 Eucalyptus grandis
Eucgr.G02935 5.0kb downstream 5.0kb downstream 8149 true Chr07: 50555817-50563965 Eucalyptus grandis
Eucgr.G02935 5.0kb downstream 5.0kb downstream 5000 false Chr07: 50558966-50563965 Eucalyptus grandis
Eucgr.G02935 10.0kb upstream 10.0kb upstream 13149 true Chr07: 50545817-50558965 Eucalyptus grandis
Eucgr.G02935 10.0kb upstream 10.0kb upstream 10000 false Chr07: 50545817-50555816 Eucalyptus grandis
Eucgr.G02935 10.0kb downstream 10.0kb downstream 13149 true Chr07: 50555817-50568965 Eucalyptus grandis
Eucgr.G02935 10.0kb downstream 10.0kb downstream 10000 false Chr07: 50558966-50568965 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124051638 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.2506 0.0 25.5392   High
cufflinks 0.348377 0.0 1.12159 Low Low
cufflinks 12.2687 0.0 27.6852   High
cufflinks 0.636441 0.0 1.89997    
cufflinks 0.484297 0.0 1.49796 Low  
cufflinks 4.73745 0.0 11.577    

0 Strain