Gene : Eucgr.G02908 E. grandis v2.0
Defline:  (1 of 5) PTHR24012:SF386 - PHRAGMOPLASTIN INTERACTING PROTEIN 1 Genomic Order:  2399
Name:  ? Eucgr.G02908 Secondary Identifier:  ? PAC:32070589
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02908 0.5kb upstream 0.5kb upstream 5198 true Chr07: 50168795-50173992 Eucalyptus grandis
Eucgr.G02908 0.5kb upstream 0.5kb upstream 500 false Chr07: 50168795-50169294 Eucalyptus grandis
Eucgr.G02908 0.5kb downstream 0.5kb downstream 5198 true Chr07: 50169295-50174492 Eucalyptus grandis
Eucgr.G02908 0.5kb downstream 0.5kb downstream 500 false Chr07: 50173993-50174492 Eucalyptus grandis
Eucgr.G02908 1.0kb upstream 1.0kb upstream 5698 true Chr07: 50168295-50173992 Eucalyptus grandis
Eucgr.G02908 1.0kb upstream 1.0kb upstream 1000 false Chr07: 50168295-50169294 Eucalyptus grandis
Eucgr.G02908 1.0kb downstream 1.0kb downstream 5698 true Chr07: 50169295-50174992 Eucalyptus grandis
Eucgr.G02908 1.0kb downstream 1.0kb downstream 1000 false Chr07: 50173993-50174992 Eucalyptus grandis
Eucgr.G02908 2.0kb upstream 2.0kb upstream 6698 true Chr07: 50167295-50173992 Eucalyptus grandis
Eucgr.G02908 2.0kb upstream 2.0kb upstream 2000 false Chr07: 50167295-50169294 Eucalyptus grandis
Eucgr.G02908 2.0kb downstream 2.0kb downstream 6698 true Chr07: 50169295-50175992 Eucalyptus grandis
Eucgr.G02908 2.0kb downstream 2.0kb downstream 2000 false Chr07: 50173993-50175992 Eucalyptus grandis
Eucgr.G02908 5.0kb upstream 5.0kb upstream 9698 true Chr07: 50164295-50173992 Eucalyptus grandis
Eucgr.G02908 5.0kb upstream 5.0kb upstream 5000 false Chr07: 50164295-50169294 Eucalyptus grandis
Eucgr.G02908 5.0kb downstream 5.0kb downstream 9698 true Chr07: 50169295-50178992 Eucalyptus grandis
Eucgr.G02908 5.0kb downstream 5.0kb downstream 5000 false Chr07: 50173993-50178992 Eucalyptus grandis
Eucgr.G02908 10.0kb upstream 10.0kb upstream 14698 true Chr07: 50159295-50173992 Eucalyptus grandis
Eucgr.G02908 10.0kb upstream 10.0kb upstream 10000 false Chr07: 50159295-50169294 Eucalyptus grandis
Eucgr.G02908 10.0kb downstream 10.0kb downstream 14698 true Chr07: 50169295-50183992 Eucalyptus grandis
Eucgr.G02908 10.0kb downstream 10.0kb downstream 10000 false Chr07: 50173993-50183992 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069375 5270 Rosid View MSA
123748314 5271 Pentapetalae View MSA
122791065 5272 Eudicot View MSA
122048889 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348554 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.07171 0.0 7.33836    
cufflinks 2.21262 0.0 5.58065    
cufflinks 3.27329 0.0 7.74499    
cufflinks 1.87372 0.0 4.75693   Low
cufflinks 3.01575 0.0 7.21357    
cufflinks 3.06648 0.0 7.34928    

0 Strain