Gene : Eucgr.G02841 E. grandis v2.0
Defline:  (1 of 2) K02706 - photosystem II P680 reaction center D2 protein Genomic Order:  2302
Name:  ? Eucgr.G02841 Secondary Identifier:  ? PAC:32070543
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PHOTOALL-PWY Eucalyptus grandis pathologic  
Egrandis PWY-101 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02841 0.5kb upstream 0.5kb upstream 964 true Chr07: 48753704-48754667 Eucalyptus grandis
Eucgr.G02841 0.5kb upstream 0.5kb upstream 500 false Chr07: 48754168-48754667 Eucalyptus grandis
Eucgr.G02841 0.5kb downstream 0.5kb downstream 964 true Chr07: 48753204-48754167 Eucalyptus grandis
Eucgr.G02841 0.5kb downstream 0.5kb downstream 500 false Chr07: 48753204-48753703 Eucalyptus grandis
Eucgr.G02841 1.0kb upstream 1.0kb upstream 1464 true Chr07: 48753704-48755167 Eucalyptus grandis
Eucgr.G02841 1.0kb upstream 1.0kb upstream 1000 false Chr07: 48754168-48755167 Eucalyptus grandis
Eucgr.G02841 1.0kb downstream 1.0kb downstream 1464 true Chr07: 48752704-48754167 Eucalyptus grandis
Eucgr.G02841 1.0kb downstream 1.0kb downstream 1000 false Chr07: 48752704-48753703 Eucalyptus grandis
Eucgr.G02841 2.0kb upstream 2.0kb upstream 2464 true Chr07: 48753704-48756167 Eucalyptus grandis
Eucgr.G02841 2.0kb upstream 2.0kb upstream 2000 false Chr07: 48754168-48756167 Eucalyptus grandis
Eucgr.G02841 2.0kb downstream 2.0kb downstream 2464 true Chr07: 48751704-48754167 Eucalyptus grandis
Eucgr.G02841 2.0kb downstream 2.0kb downstream 2000 false Chr07: 48751704-48753703 Eucalyptus grandis
Eucgr.G02841 5.0kb upstream 5.0kb upstream 5464 true Chr07: 48753704-48759167 Eucalyptus grandis
Eucgr.G02841 5.0kb upstream 5.0kb upstream 5000 false Chr07: 48754168-48759167 Eucalyptus grandis
Eucgr.G02841 5.0kb downstream 5.0kb downstream 5464 true Chr07: 48748704-48754167 Eucalyptus grandis
Eucgr.G02841 5.0kb downstream 5.0kb downstream 5000 false Chr07: 48748704-48753703 Eucalyptus grandis
Eucgr.G02841 10.0kb upstream 10.0kb upstream 10464 true Chr07: 48753704-48764167 Eucalyptus grandis
Eucgr.G02841 10.0kb upstream 10.0kb upstream 10000 false Chr07: 48754168-48764167 Eucalyptus grandis
Eucgr.G02841 10.0kb downstream 10.0kb downstream 10464 true Chr07: 48743704-48754167 Eucalyptus grandis
Eucgr.G02841 10.0kb downstream 10.0kb downstream 10000 false Chr07: 48743704-48753703 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073414 5270 Rosid View MSA
123753260 5271 Pentapetalae View MSA
122797414 5272 Eudicot View MSA
122047558 5273 Angiosperm View MSA
121350331 5274 Embryophyte View MSA
123381681 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.75397 0.0 28.0776   Low
cufflinks 16.8266 0.0 45.8344    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 13.1975 0.0 37.3456    

0 Strain