Gene : Eucgr.G02852 E. grandis v2.0
Defline:  (1 of 7) PTHR10362//PTHR10362:SF19 - HISTIDINE AMMONIA-LYASE Genomic Order:  2292
Name:  ? Eucgr.G02852 Secondary Identifier:  ? PAC:32073391
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-1121 Eucalyptus grandis pathologic  
Egrandis PWY1F-467 Eucalyptus grandis pathologic  
Egrandis PWY-7186 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02852 0.5kb upstream 0.5kb upstream 3839 true Chr07: 48516214-48520052 Eucalyptus grandis
Eucgr.G02852 0.5kb upstream 0.5kb upstream 500 false Chr07: 48519553-48520052 Eucalyptus grandis
Eucgr.G02852 0.5kb downstream 0.5kb downstream 3839 true Chr07: 48515714-48519552 Eucalyptus grandis
Eucgr.G02852 0.5kb downstream 0.5kb downstream 500 false Chr07: 48515714-48516213 Eucalyptus grandis
Eucgr.G02852 1.0kb upstream 1.0kb upstream 4339 true Chr07: 48516214-48520552 Eucalyptus grandis
Eucgr.G02852 1.0kb upstream 1.0kb upstream 1000 false Chr07: 48519553-48520552 Eucalyptus grandis
Eucgr.G02852 1.0kb downstream 1.0kb downstream 4339 true Chr07: 48515214-48519552 Eucalyptus grandis
Eucgr.G02852 1.0kb downstream 1.0kb downstream 1000 false Chr07: 48515214-48516213 Eucalyptus grandis
Eucgr.G02852 2.0kb upstream 2.0kb upstream 5339 true Chr07: 48516214-48521552 Eucalyptus grandis
Eucgr.G02852 2.0kb upstream 2.0kb upstream 2000 false Chr07: 48519553-48521552 Eucalyptus grandis
Eucgr.G02852 2.0kb downstream 2.0kb downstream 5339 true Chr07: 48514214-48519552 Eucalyptus grandis
Eucgr.G02852 2.0kb downstream 2.0kb downstream 2000 false Chr07: 48514214-48516213 Eucalyptus grandis
Eucgr.G02852 5.0kb upstream 5.0kb upstream 8339 true Chr07: 48516214-48524552 Eucalyptus grandis
Eucgr.G02852 5.0kb upstream 5.0kb upstream 5000 false Chr07: 48519553-48524552 Eucalyptus grandis
Eucgr.G02852 5.0kb downstream 5.0kb downstream 8339 true Chr07: 48511214-48519552 Eucalyptus grandis
Eucgr.G02852 5.0kb downstream 5.0kb downstream 5000 false Chr07: 48511214-48516213 Eucalyptus grandis
Eucgr.G02852 10.0kb upstream 10.0kb upstream 13339 true Chr07: 48516214-48529552 Eucalyptus grandis
Eucgr.G02852 10.0kb upstream 10.0kb upstream 10000 false Chr07: 48519553-48529552 Eucalyptus grandis
Eucgr.G02852 10.0kb downstream 10.0kb downstream 13339 true Chr07: 48506214-48519552 Eucalyptus grandis
Eucgr.G02852 10.0kb downstream 10.0kb downstream 10000 false Chr07: 48506214-48516213 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070450 5270 Rosid View MSA
123747775 5271 Pentapetalae View MSA
122795347 5272 Eudicot View MSA
122043246 5273 Angiosperm View MSA
121351477 5274 Embryophyte View MSA
123382181 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.422695 0.0 1.30158 Low Low
cufflinks 108.736 0.0 256.748 High High
cufflinks 1.55316 0.0 4.20074    
cufflinks 74.0943 0.0 169.372 High High
cufflinks 4.08056 0.0 9.97754    
cufflinks 4.09664 0.0 9.86462    

0 Strain