Gene : Eucgr.G02823 E. grandis v2.0
Defline:  (1 of 1) 2.6.1.85 - Aminodeoxychorismate synthase / ADC synthase Genomic Order:  2318
Name:  ? Eucgr.G02823 Secondary Identifier:  ? PAC:32072324
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis PWY-6543 Eucalyptus grandis pathologic  
Egrandis PWY-6612 Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02823 0.5kb upstream 0.5kb upstream 7096 true Chr07: 48940627-48947722 Eucalyptus grandis
Eucgr.G02823 0.5kb upstream 0.5kb upstream 500 false Chr07: 48947223-48947722 Eucalyptus grandis
Eucgr.G02823 0.5kb downstream 0.5kb downstream 7096 true Chr07: 48940127-48947222 Eucalyptus grandis
Eucgr.G02823 0.5kb downstream 0.5kb downstream 500 false Chr07: 48940127-48940626 Eucalyptus grandis
Eucgr.G02823 1.0kb upstream 1.0kb upstream 7596 true Chr07: 48940627-48948222 Eucalyptus grandis
Eucgr.G02823 1.0kb upstream 1.0kb upstream 1000 false Chr07: 48947223-48948222 Eucalyptus grandis
Eucgr.G02823 1.0kb downstream 1.0kb downstream 7596 true Chr07: 48939627-48947222 Eucalyptus grandis
Eucgr.G02823 1.0kb downstream 1.0kb downstream 1000 false Chr07: 48939627-48940626 Eucalyptus grandis
Eucgr.G02823 2.0kb upstream 2.0kb upstream 8596 true Chr07: 48940627-48949222 Eucalyptus grandis
Eucgr.G02823 2.0kb upstream 2.0kb upstream 2000 false Chr07: 48947223-48949222 Eucalyptus grandis
Eucgr.G02823 2.0kb downstream 2.0kb downstream 8596 true Chr07: 48938627-48947222 Eucalyptus grandis
Eucgr.G02823 2.0kb downstream 2.0kb downstream 2000 false Chr07: 48938627-48940626 Eucalyptus grandis
Eucgr.G02823 5.0kb upstream 5.0kb upstream 11596 true Chr07: 48940627-48952222 Eucalyptus grandis
Eucgr.G02823 5.0kb upstream 5.0kb upstream 5000 false Chr07: 48947223-48952222 Eucalyptus grandis
Eucgr.G02823 5.0kb downstream 5.0kb downstream 11596 true Chr07: 48935627-48947222 Eucalyptus grandis
Eucgr.G02823 5.0kb downstream 5.0kb downstream 5000 false Chr07: 48935627-48940626 Eucalyptus grandis
Eucgr.G02823 10.0kb upstream 10.0kb upstream 16596 true Chr07: 48940627-48957222 Eucalyptus grandis
Eucgr.G02823 10.0kb upstream 10.0kb upstream 10000 false Chr07: 48947223-48957222 Eucalyptus grandis
Eucgr.G02823 10.0kb downstream 10.0kb downstream 16596 true Chr07: 48930627-48947222 Eucalyptus grandis
Eucgr.G02823 10.0kb downstream 10.0kb downstream 10000 false Chr07: 48930627-48940626 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072524 5270 Rosid View MSA
123738750 5271 Pentapetalae View MSA
122789996 5272 Eudicot View MSA
122041819 5273 Angiosperm View MSA
121349343 5274 Embryophyte View MSA
123425375 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.89664 0.0 13.8295    
cufflinks 4.27396 0.0 10.2422   Low
cufflinks 4.76481 0.0 11.3415    
cufflinks 6.12347 0.0 14.2043    
cufflinks 13.023 0.0 29.0285   High
cufflinks 7.17037 0.0 16.63    

0 Strain