Gene : Eucgr.G02677 E. grandis v2.0
Defline:  (1 of 2) PTHR12820 - VACUOLAR SORTING PROTEIN 53 Genomic Order:  2180
Name:  ? Eucgr.G02677 Secondary Identifier:  ? PAC:32070661
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02677 0.5kb upstream 0.5kb upstream 12719 true Chr07: 47258384-47271102 Eucalyptus grandis
Eucgr.G02677 0.5kb upstream 0.5kb upstream 500 false Chr07: 47270603-47271102 Eucalyptus grandis
Eucgr.G02677 0.5kb downstream 0.5kb downstream 12719 true Chr07: 47257884-47270602 Eucalyptus grandis
Eucgr.G02677 0.5kb downstream 0.5kb downstream 500 false Chr07: 47257884-47258383 Eucalyptus grandis
Eucgr.G02677 1.0kb upstream 1.0kb upstream 13219 true Chr07: 47258384-47271602 Eucalyptus grandis
Eucgr.G02677 1.0kb upstream 1.0kb upstream 1000 false Chr07: 47270603-47271602 Eucalyptus grandis
Eucgr.G02677 1.0kb downstream 1.0kb downstream 13219 true Chr07: 47257384-47270602 Eucalyptus grandis
Eucgr.G02677 1.0kb downstream 1.0kb downstream 1000 false Chr07: 47257384-47258383 Eucalyptus grandis
Eucgr.G02677 2.0kb upstream 2.0kb upstream 14219 true Chr07: 47258384-47272602 Eucalyptus grandis
Eucgr.G02677 2.0kb upstream 2.0kb upstream 2000 false Chr07: 47270603-47272602 Eucalyptus grandis
Eucgr.G02677 2.0kb downstream 2.0kb downstream 14219 true Chr07: 47256384-47270602 Eucalyptus grandis
Eucgr.G02677 2.0kb downstream 2.0kb downstream 2000 false Chr07: 47256384-47258383 Eucalyptus grandis
Eucgr.G02677 5.0kb upstream 5.0kb upstream 17219 true Chr07: 47258384-47275602 Eucalyptus grandis
Eucgr.G02677 5.0kb upstream 5.0kb upstream 5000 false Chr07: 47270603-47275602 Eucalyptus grandis
Eucgr.G02677 5.0kb downstream 5.0kb downstream 17219 true Chr07: 47253384-47270602 Eucalyptus grandis
Eucgr.G02677 5.0kb downstream 5.0kb downstream 5000 false Chr07: 47253384-47258383 Eucalyptus grandis
Eucgr.G02677 10.0kb upstream 10.0kb upstream 22219 true Chr07: 47258384-47280602 Eucalyptus grandis
Eucgr.G02677 10.0kb upstream 10.0kb upstream 10000 false Chr07: 47270603-47280602 Eucalyptus grandis
Eucgr.G02677 10.0kb downstream 10.0kb downstream 22219 true Chr07: 47248384-47270602 Eucalyptus grandis
Eucgr.G02677 10.0kb downstream 10.0kb downstream 10000 false Chr07: 47248384-47258383 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124060785 5270 Rosid View MSA
123745504 5271 Pentapetalae View MSA
122792209 5272 Eudicot View MSA
122042616 5273 Angiosperm View MSA
121345322 5274 Embryophyte View MSA
123426739 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.5362 0.0 23.4843    
cufflinks 19.7862 0.0 43.8061   High
cufflinks 9.54343 0.0 21.3039    
cufflinks 22.4152 0.0 49.753   High
cufflinks 13.3208 0.0 29.5095    
cufflinks 10.0672 0.0 22.5079    

0 Strain