Gene : Eucgr.G02653 E. grandis v2.0
Defline:  (1 of 1) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS Genomic Order:  2163
Name:  ? Eucgr.G02653 Secondary Identifier:  ? PAC:32073331
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G02653 0.5kb upstream 0.5kb upstream 4101 true Chr07: 47121450-47125550 Eucalyptus grandis
Eucgr.G02653 0.5kb upstream 0.5kb upstream 500 false Chr07: 47121450-47121949 Eucalyptus grandis
Eucgr.G02653 0.5kb downstream 0.5kb downstream 4101 true Chr07: 47121950-47126050 Eucalyptus grandis
Eucgr.G02653 0.5kb downstream 0.5kb downstream 500 false Chr07: 47125551-47126050 Eucalyptus grandis
Eucgr.G02653 1.0kb upstream 1.0kb upstream 4601 true Chr07: 47120950-47125550 Eucalyptus grandis
Eucgr.G02653 1.0kb upstream 1.0kb upstream 1000 false Chr07: 47120950-47121949 Eucalyptus grandis
Eucgr.G02653 1.0kb downstream 1.0kb downstream 4601 true Chr07: 47121950-47126550 Eucalyptus grandis
Eucgr.G02653 1.0kb downstream 1.0kb downstream 1000 false Chr07: 47125551-47126550 Eucalyptus grandis
Eucgr.G02653 2.0kb upstream 2.0kb upstream 5601 true Chr07: 47119950-47125550 Eucalyptus grandis
Eucgr.G02653 2.0kb upstream 2.0kb upstream 2000 false Chr07: 47119950-47121949 Eucalyptus grandis
Eucgr.G02653 2.0kb downstream 2.0kb downstream 5601 true Chr07: 47121950-47127550 Eucalyptus grandis
Eucgr.G02653 2.0kb downstream 2.0kb downstream 2000 false Chr07: 47125551-47127550 Eucalyptus grandis
Eucgr.G02653 5.0kb upstream 5.0kb upstream 8601 true Chr07: 47116950-47125550 Eucalyptus grandis
Eucgr.G02653 5.0kb upstream 5.0kb upstream 5000 false Chr07: 47116950-47121949 Eucalyptus grandis
Eucgr.G02653 5.0kb downstream 5.0kb downstream 8601 true Chr07: 47121950-47130550 Eucalyptus grandis
Eucgr.G02653 5.0kb downstream 5.0kb downstream 5000 false Chr07: 47125551-47130550 Eucalyptus grandis
Eucgr.G02653 10.0kb upstream 10.0kb upstream 13601 true Chr07: 47111950-47125550 Eucalyptus grandis
Eucgr.G02653 10.0kb upstream 10.0kb upstream 10000 false Chr07: 47111950-47121949 Eucalyptus grandis
Eucgr.G02653 10.0kb downstream 10.0kb downstream 13601 true Chr07: 47121950-47135550 Eucalyptus grandis
Eucgr.G02653 10.0kb downstream 10.0kb downstream 10000 false Chr07: 47125551-47135550 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124061735 5270 Rosid View MSA
123739408 5271 Pentapetalae View MSA
122786845 5272 Eudicot View MSA
122043852 5273 Angiosperm View MSA
121346736 5274 Embryophyte View MSA
123428704 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9814 0.0 49.496   High
cufflinks 8.08412 0.0 18.9084   Low
cufflinks 21.1141 0.0 47.2099    
cufflinks 8.8076 0.0 20.4167    
cufflinks 11.2088 0.0 26.7675    
cufflinks 19.4309 0.0 43.9369    

0 Strain