Gene : Eucgr.G03192 E. grandis v2.0
Defline:  (1 of 6) PTHR21713 - NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED Genomic Order:  2653
Name:  ? Eucgr.G03192 Secondary Identifier:  ? PAC:32071796
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03192 0.5kb upstream 0.5kb upstream 3546 true Chr07: 52826339-52829884 Eucalyptus grandis
Eucgr.G03192 0.5kb upstream 0.5kb upstream 500 false Chr07: 52829385-52829884 Eucalyptus grandis
Eucgr.G03192 0.5kb downstream 0.5kb downstream 3546 true Chr07: 52825839-52829384 Eucalyptus grandis
Eucgr.G03192 0.5kb downstream 0.5kb downstream 500 false Chr07: 52825839-52826338 Eucalyptus grandis
Eucgr.G03192 1.0kb upstream 1.0kb upstream 4046 true Chr07: 52826339-52830384 Eucalyptus grandis
Eucgr.G03192 1.0kb upstream 1.0kb upstream 1000 false Chr07: 52829385-52830384 Eucalyptus grandis
Eucgr.G03192 1.0kb downstream 1.0kb downstream 4046 true Chr07: 52825339-52829384 Eucalyptus grandis
Eucgr.G03192 1.0kb downstream 1.0kb downstream 1000 false Chr07: 52825339-52826338 Eucalyptus grandis
Eucgr.G03192 2.0kb upstream 2.0kb upstream 5046 true Chr07: 52826339-52831384 Eucalyptus grandis
Eucgr.G03192 2.0kb upstream 2.0kb upstream 2000 false Chr07: 52829385-52831384 Eucalyptus grandis
Eucgr.G03192 2.0kb downstream 2.0kb downstream 5046 true Chr07: 52824339-52829384 Eucalyptus grandis
Eucgr.G03192 2.0kb downstream 2.0kb downstream 2000 false Chr07: 52824339-52826338 Eucalyptus grandis
Eucgr.G03192 5.0kb upstream 5.0kb upstream 8046 true Chr07: 52826339-52834384 Eucalyptus grandis
Eucgr.G03192 5.0kb upstream 5.0kb upstream 5000 false Chr07: 52829385-52834384 Eucalyptus grandis
Eucgr.G03192 5.0kb downstream 5.0kb downstream 8046 true Chr07: 52821339-52829384 Eucalyptus grandis
Eucgr.G03192 5.0kb downstream 5.0kb downstream 5000 false Chr07: 52821339-52826338 Eucalyptus grandis
Eucgr.G03192 10.0kb upstream 10.0kb upstream 13046 true Chr07: 52826339-52839384 Eucalyptus grandis
Eucgr.G03192 10.0kb upstream 10.0kb upstream 10000 false Chr07: 52829385-52839384 Eucalyptus grandis
Eucgr.G03192 10.0kb downstream 10.0kb downstream 13046 true Chr07: 52816339-52829384 Eucalyptus grandis
Eucgr.G03192 10.0kb downstream 10.0kb downstream 10000 false Chr07: 52816339-52826338 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073209 5270 Rosid View MSA
123753516 5271 Pentapetalae View MSA
122797192 5272 Eudicot View MSA
122043596 5273 Angiosperm View MSA
121351312 5274 Embryophyte View MSA
123424753 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 86.5443 0.0 192.635 High  
cufflinks 48.659 0.0 107.617 High Low
cufflinks 74.9105 0.0 166.283 High  
cufflinks 91.6038 0.0 204.739 High  
cufflinks 125.44 0.0 284.188 High High
cufflinks 69.3131 0.0 153.438 High  

0 Strain