Gene : Eucgr.G03191 E. grandis v2.0
Defline:  (1 of 4) PTHR13068//PTHR13068:SF20 - CGI-12 PROTEIN-RELATED Genomic Order:  2652
Name:  ? Eucgr.G03191 Secondary Identifier:  ? PAC:32072603
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03191 0.5kb upstream 0.5kb upstream 2139 true Chr07: 52824002-52826140 Eucalyptus grandis
Eucgr.G03191 0.5kb upstream 0.5kb upstream 500 false Chr07: 52824002-52824501 Eucalyptus grandis
Eucgr.G03191 0.5kb downstream 0.5kb downstream 2139 true Chr07: 52824502-52826640 Eucalyptus grandis
Eucgr.G03191 0.5kb downstream 0.5kb downstream 500 false Chr07: 52826141-52826640 Eucalyptus grandis
Eucgr.G03191 1.0kb upstream 1.0kb upstream 2639 true Chr07: 52823502-52826140 Eucalyptus grandis
Eucgr.G03191 1.0kb upstream 1.0kb upstream 1000 false Chr07: 52823502-52824501 Eucalyptus grandis
Eucgr.G03191 1.0kb downstream 1.0kb downstream 2639 true Chr07: 52824502-52827140 Eucalyptus grandis
Eucgr.G03191 1.0kb downstream 1.0kb downstream 1000 false Chr07: 52826141-52827140 Eucalyptus grandis
Eucgr.G03191 2.0kb upstream 2.0kb upstream 3639 true Chr07: 52822502-52826140 Eucalyptus grandis
Eucgr.G03191 2.0kb upstream 2.0kb upstream 2000 false Chr07: 52822502-52824501 Eucalyptus grandis
Eucgr.G03191 2.0kb downstream 2.0kb downstream 3639 true Chr07: 52824502-52828140 Eucalyptus grandis
Eucgr.G03191 2.0kb downstream 2.0kb downstream 2000 false Chr07: 52826141-52828140 Eucalyptus grandis
Eucgr.G03191 5.0kb upstream 5.0kb upstream 6639 true Chr07: 52819502-52826140 Eucalyptus grandis
Eucgr.G03191 5.0kb upstream 5.0kb upstream 5000 false Chr07: 52819502-52824501 Eucalyptus grandis
Eucgr.G03191 5.0kb downstream 5.0kb downstream 6639 true Chr07: 52824502-52831140 Eucalyptus grandis
Eucgr.G03191 5.0kb downstream 5.0kb downstream 5000 false Chr07: 52826141-52831140 Eucalyptus grandis
Eucgr.G03191 10.0kb upstream 10.0kb upstream 11639 true Chr07: 52814502-52826140 Eucalyptus grandis
Eucgr.G03191 10.0kb upstream 10.0kb upstream 10000 false Chr07: 52814502-52824501 Eucalyptus grandis
Eucgr.G03191 10.0kb downstream 10.0kb downstream 11639 true Chr07: 52824502-52836140 Eucalyptus grandis
Eucgr.G03191 10.0kb downstream 10.0kb downstream 10000 false Chr07: 52826141-52836140 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124073923 5270 Rosid View MSA
123752887 5271 Pentapetalae View MSA
122796698 5272 Eudicot View MSA
122050390 5273 Angiosperm View MSA
121351168 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.66507 0.0 4.62833    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 1.9953 0.0 5.44345    
cufflinks 2.10189 0.0 5.69667    
cufflinks 0.320054 0.0 1.0835 Low Low
cufflinks 4.30214 0.0 10.9141   High

0 Strain