Gene : Eucgr.G03196 E. grandis v2.0
Defline:  (1 of 1) PTHR30246 - 2-KETO-3-DEOXY-6-PHOSPHOGLUCONATE ALDOLASE Genomic Order:  2657
Name:  ? Eucgr.G03196 Secondary Identifier:  ? PAC:32069968
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03196 0.5kb upstream 0.5kb upstream 4995 true Chr07: 52840353-52845347 Eucalyptus grandis
Eucgr.G03196 0.5kb upstream 0.5kb upstream 500 false Chr07: 52844848-52845347 Eucalyptus grandis
Eucgr.G03196 0.5kb downstream 0.5kb downstream 4995 true Chr07: 52839853-52844847 Eucalyptus grandis
Eucgr.G03196 0.5kb downstream 0.5kb downstream 500 false Chr07: 52839853-52840352 Eucalyptus grandis
Eucgr.G03196 1.0kb upstream 1.0kb upstream 5495 true Chr07: 52840353-52845847 Eucalyptus grandis
Eucgr.G03196 1.0kb upstream 1.0kb upstream 1000 false Chr07: 52844848-52845847 Eucalyptus grandis
Eucgr.G03196 1.0kb downstream 1.0kb downstream 5495 true Chr07: 52839353-52844847 Eucalyptus grandis
Eucgr.G03196 1.0kb downstream 1.0kb downstream 1000 false Chr07: 52839353-52840352 Eucalyptus grandis
Eucgr.G03196 2.0kb upstream 2.0kb upstream 6495 true Chr07: 52840353-52846847 Eucalyptus grandis
Eucgr.G03196 2.0kb upstream 2.0kb upstream 2000 false Chr07: 52844848-52846847 Eucalyptus grandis
Eucgr.G03196 2.0kb downstream 2.0kb downstream 6495 true Chr07: 52838353-52844847 Eucalyptus grandis
Eucgr.G03196 2.0kb downstream 2.0kb downstream 2000 false Chr07: 52838353-52840352 Eucalyptus grandis
Eucgr.G03196 5.0kb upstream 5.0kb upstream 9495 true Chr07: 52840353-52849847 Eucalyptus grandis
Eucgr.G03196 5.0kb upstream 5.0kb upstream 5000 false Chr07: 52844848-52849847 Eucalyptus grandis
Eucgr.G03196 5.0kb downstream 5.0kb downstream 9495 true Chr07: 52835353-52844847 Eucalyptus grandis
Eucgr.G03196 5.0kb downstream 5.0kb downstream 5000 false Chr07: 52835353-52840352 Eucalyptus grandis
Eucgr.G03196 10.0kb upstream 10.0kb upstream 14495 true Chr07: 52840353-52854847 Eucalyptus grandis
Eucgr.G03196 10.0kb upstream 10.0kb upstream 10000 false Chr07: 52844848-52854847 Eucalyptus grandis
Eucgr.G03196 10.0kb downstream 10.0kb downstream 14495 true Chr07: 52830353-52844847 Eucalyptus grandis
Eucgr.G03196 10.0kb downstream 10.0kb downstream 10000 false Chr07: 52830353-52840352 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124050609 5270 Rosid View MSA
123747018 5271 Pentapetalae View MSA
122772076 5272 Eudicot View MSA
122048375 5273 Angiosperm View MSA
121348622 5274 Embryophyte View MSA
123380942 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.68358 0.0 7.69034    
cufflinks 2.76566 0.0 7.83922    
cufflinks 3.60505 0.0 9.99981    
cufflinks 1.88495 0.0 5.78036    
cufflinks 1.18537 0.0 4.01743   Low
cufflinks 11.4571 0.0 27.0093   High

0 Strain