Gene : Eucgr.G03090 E. grandis v2.0
Defline:  (1 of 1) PTHR24031:SF2 - ATP-DEPENDENT RNA HELICASE DDX55 Genomic Order:  2560
Name:  ? Eucgr.G03090 Secondary Identifier:  ? PAC:32070144
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03090 0.5kb upstream 0.5kb upstream 5736 true Chr07: 52028981-52034716 Eucalyptus grandis
Eucgr.G03090 0.5kb upstream 0.5kb upstream 500 false Chr07: 52034217-52034716 Eucalyptus grandis
Eucgr.G03090 0.5kb downstream 0.5kb downstream 5736 true Chr07: 52028481-52034216 Eucalyptus grandis
Eucgr.G03090 0.5kb downstream 0.5kb downstream 500 false Chr07: 52028481-52028980 Eucalyptus grandis
Eucgr.G03090 1.0kb upstream 1.0kb upstream 6236 true Chr07: 52028981-52035216 Eucalyptus grandis
Eucgr.G03090 1.0kb upstream 1.0kb upstream 1000 false Chr07: 52034217-52035216 Eucalyptus grandis
Eucgr.G03090 1.0kb downstream 1.0kb downstream 6236 true Chr07: 52027981-52034216 Eucalyptus grandis
Eucgr.G03090 1.0kb downstream 1.0kb downstream 1000 false Chr07: 52027981-52028980 Eucalyptus grandis
Eucgr.G03090 2.0kb upstream 2.0kb upstream 7236 true Chr07: 52028981-52036216 Eucalyptus grandis
Eucgr.G03090 2.0kb upstream 2.0kb upstream 2000 false Chr07: 52034217-52036216 Eucalyptus grandis
Eucgr.G03090 2.0kb downstream 2.0kb downstream 7236 true Chr07: 52026981-52034216 Eucalyptus grandis
Eucgr.G03090 2.0kb downstream 2.0kb downstream 2000 false Chr07: 52026981-52028980 Eucalyptus grandis
Eucgr.G03090 5.0kb upstream 5.0kb upstream 10236 true Chr07: 52028981-52039216 Eucalyptus grandis
Eucgr.G03090 5.0kb upstream 5.0kb upstream 5000 false Chr07: 52034217-52039216 Eucalyptus grandis
Eucgr.G03090 5.0kb downstream 5.0kb downstream 10236 true Chr07: 52023981-52034216 Eucalyptus grandis
Eucgr.G03090 5.0kb downstream 5.0kb downstream 5000 false Chr07: 52023981-52028980 Eucalyptus grandis
Eucgr.G03090 10.0kb upstream 10.0kb upstream 15236 true Chr07: 52028981-52044216 Eucalyptus grandis
Eucgr.G03090 10.0kb upstream 10.0kb upstream 10000 false Chr07: 52034217-52044216 Eucalyptus grandis
Eucgr.G03090 10.0kb downstream 10.0kb downstream 15236 true Chr07: 52018981-52034216 Eucalyptus grandis
Eucgr.G03090 10.0kb downstream 10.0kb downstream 10000 false Chr07: 52018981-52028980 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068016 5270 Rosid View MSA
123739491 5271 Pentapetalae View MSA
122792074 5272 Eudicot View MSA
122042767 5273 Angiosperm View MSA
123429160 5275 Viridiplantae View MSA
121346858 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.31386 0.0 18.775    
cufflinks 5.13223 0.0 11.9538    
cufflinks 8.72118 0.0 19.6255    
cufflinks 4.13375 0.0 9.80313    
cufflinks 3.28581 0.0 7.99354   Low
cufflinks 10.9869 0.0 24.5301   High

0 Strain