Gene : Eucgr.G03107 E. grandis v2.0
Defline:  (1 of 2) PTHR13768:SF8 - SOLUBLE NSF ATTACHMENT PROTEIN Genomic Order:  2576
Name:  ? Eucgr.G03107 Secondary Identifier:  ? PAC:32073035
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03107 0.5kb upstream 0.5kb upstream 4968 true Chr07: 52136746-52141713 Eucalyptus grandis
Eucgr.G03107 0.5kb upstream 0.5kb upstream 500 false Chr07: 52141214-52141713 Eucalyptus grandis
Eucgr.G03107 0.5kb downstream 0.5kb downstream 4968 true Chr07: 52136246-52141213 Eucalyptus grandis
Eucgr.G03107 0.5kb downstream 0.5kb downstream 500 false Chr07: 52136246-52136745 Eucalyptus grandis
Eucgr.G03107 1.0kb upstream 1.0kb upstream 5468 true Chr07: 52136746-52142213 Eucalyptus grandis
Eucgr.G03107 1.0kb upstream 1.0kb upstream 1000 false Chr07: 52141214-52142213 Eucalyptus grandis
Eucgr.G03107 1.0kb downstream 1.0kb downstream 5468 true Chr07: 52135746-52141213 Eucalyptus grandis
Eucgr.G03107 1.0kb downstream 1.0kb downstream 1000 false Chr07: 52135746-52136745 Eucalyptus grandis
Eucgr.G03107 2.0kb upstream 2.0kb upstream 6468 true Chr07: 52136746-52143213 Eucalyptus grandis
Eucgr.G03107 2.0kb upstream 2.0kb upstream 2000 false Chr07: 52141214-52143213 Eucalyptus grandis
Eucgr.G03107 2.0kb downstream 2.0kb downstream 6468 true Chr07: 52134746-52141213 Eucalyptus grandis
Eucgr.G03107 2.0kb downstream 2.0kb downstream 2000 false Chr07: 52134746-52136745 Eucalyptus grandis
Eucgr.G03107 5.0kb upstream 5.0kb upstream 9468 true Chr07: 52136746-52146213 Eucalyptus grandis
Eucgr.G03107 5.0kb upstream 5.0kb upstream 5000 false Chr07: 52141214-52146213 Eucalyptus grandis
Eucgr.G03107 5.0kb downstream 5.0kb downstream 9468 true Chr07: 52131746-52141213 Eucalyptus grandis
Eucgr.G03107 5.0kb downstream 5.0kb downstream 5000 false Chr07: 52131746-52136745 Eucalyptus grandis
Eucgr.G03107 10.0kb upstream 10.0kb upstream 14468 true Chr07: 52136746-52151213 Eucalyptus grandis
Eucgr.G03107 10.0kb upstream 10.0kb upstream 10000 false Chr07: 52141214-52151213 Eucalyptus grandis
Eucgr.G03107 10.0kb downstream 10.0kb downstream 14468 true Chr07: 52126746-52141213 Eucalyptus grandis
Eucgr.G03107 10.0kb downstream 10.0kb downstream 10000 false Chr07: 52126746-52136745 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070915 5270 Rosid View MSA
123741253 5271 Pentapetalae View MSA
122788152 5272 Eudicot View MSA
122044655 5273 Angiosperm View MSA
121343976 5274 Embryophyte View MSA
123426202 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 59.8186 0.0 178.584 High  
cufflinks 173.753 0.0 501.363 High High
cufflinks 62.6549 0.0 177.017 High  
cufflinks 214.879 0.0 715.809 High High
cufflinks 81.4128 0.0 208.972 High  
cufflinks 62.9457 0.0 163.53 High  

0 Strain