Gene : Eucgr.G03075 E. grandis v2.0
Defline:  (1 of 2) PTHR10292 - CLATHRIN HEAVY CHAIN Genomic Order:  2545
Name:  ? Eucgr.G03075 Secondary Identifier:  ? PAC:32070099
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03075 0.5kb upstream 0.5kb upstream 12886 true Chr07: 51917354-51930239 Eucalyptus grandis
Eucgr.G03075 0.5kb upstream 0.5kb upstream 500 false Chr07: 51917354-51917853 Eucalyptus grandis
Eucgr.G03075 0.5kb downstream 0.5kb downstream 12886 true Chr07: 51917854-51930739 Eucalyptus grandis
Eucgr.G03075 0.5kb downstream 0.5kb downstream 500 false Chr07: 51930240-51930739 Eucalyptus grandis
Eucgr.G03075 1.0kb upstream 1.0kb upstream 13386 true Chr07: 51916854-51930239 Eucalyptus grandis
Eucgr.G03075 1.0kb upstream 1.0kb upstream 1000 false Chr07: 51916854-51917853 Eucalyptus grandis
Eucgr.G03075 1.0kb downstream 1.0kb downstream 13386 true Chr07: 51917854-51931239 Eucalyptus grandis
Eucgr.G03075 1.0kb downstream 1.0kb downstream 1000 false Chr07: 51930240-51931239 Eucalyptus grandis
Eucgr.G03075 2.0kb upstream 2.0kb upstream 14386 true Chr07: 51915854-51930239 Eucalyptus grandis
Eucgr.G03075 2.0kb upstream 2.0kb upstream 2000 false Chr07: 51915854-51917853 Eucalyptus grandis
Eucgr.G03075 2.0kb downstream 2.0kb downstream 14386 true Chr07: 51917854-51932239 Eucalyptus grandis
Eucgr.G03075 2.0kb downstream 2.0kb downstream 2000 false Chr07: 51930240-51932239 Eucalyptus grandis
Eucgr.G03075 5.0kb upstream 5.0kb upstream 17386 true Chr07: 51912854-51930239 Eucalyptus grandis
Eucgr.G03075 5.0kb upstream 5.0kb upstream 5000 false Chr07: 51912854-51917853 Eucalyptus grandis
Eucgr.G03075 5.0kb downstream 5.0kb downstream 17386 true Chr07: 51917854-51935239 Eucalyptus grandis
Eucgr.G03075 5.0kb downstream 5.0kb downstream 5000 false Chr07: 51930240-51935239 Eucalyptus grandis
Eucgr.G03075 10.0kb upstream 10.0kb upstream 22386 true Chr07: 51907854-51930239 Eucalyptus grandis
Eucgr.G03075 10.0kb upstream 10.0kb upstream 10000 false Chr07: 51907854-51917853 Eucalyptus grandis
Eucgr.G03075 10.0kb downstream 10.0kb downstream 22386 true Chr07: 51917854-51940239 Eucalyptus grandis
Eucgr.G03075 10.0kb downstream 10.0kb downstream 10000 false Chr07: 51930240-51940239 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027117 5273 Angiosperm View MSA
124064401 5270 Rosid View MSA
123744166 5271 Pentapetalae View MSA
122788856 5272 Eudicot View MSA
121350817 5274 Embryophyte View MSA
123428843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.2553 0.0 103.975 High  
cufflinks 29.2969 0.0 68.4818    
cufflinks 42.9425 0.0 103.678 High  
cufflinks 33.4269 0.0 79.1961    
cufflinks 27.2364 0.0 63.0951   Low
cufflinks 46.8969 0.0 113.071 High High

0 Strain