Gene : Eucgr.G03076 E. grandis v2.0
Defline:  (1 of 1) PTHR12526:SF315 - GDP-MAN:MAN(3)GLCNAC(2)-PP-DOL ALPHA-1,2-MANNOSYLTRANSFERASE Genomic Order:  2546
Name:  ? Eucgr.G03076 Secondary Identifier:  ? PAC:32073012
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Egrandis MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Eucalyptus grandis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03076 0.5kb upstream 0.5kb upstream 4996 true Chr07: 51930375-51935370 Eucalyptus grandis
Eucgr.G03076 0.5kb upstream 0.5kb upstream 500 false Chr07: 51930375-51930874 Eucalyptus grandis
Eucgr.G03076 0.5kb downstream 0.5kb downstream 4996 true Chr07: 51930875-51935870 Eucalyptus grandis
Eucgr.G03076 0.5kb downstream 0.5kb downstream 500 false Chr07: 51935371-51935870 Eucalyptus grandis
Eucgr.G03076 1.0kb upstream 1.0kb upstream 5496 true Chr07: 51929875-51935370 Eucalyptus grandis
Eucgr.G03076 1.0kb upstream 1.0kb upstream 1000 false Chr07: 51929875-51930874 Eucalyptus grandis
Eucgr.G03076 1.0kb downstream 1.0kb downstream 5496 true Chr07: 51930875-51936370 Eucalyptus grandis
Eucgr.G03076 1.0kb downstream 1.0kb downstream 1000 false Chr07: 51935371-51936370 Eucalyptus grandis
Eucgr.G03076 2.0kb upstream 2.0kb upstream 6496 true Chr07: 51928875-51935370 Eucalyptus grandis
Eucgr.G03076 2.0kb upstream 2.0kb upstream 2000 false Chr07: 51928875-51930874 Eucalyptus grandis
Eucgr.G03076 2.0kb downstream 2.0kb downstream 6496 true Chr07: 51930875-51937370 Eucalyptus grandis
Eucgr.G03076 2.0kb downstream 2.0kb downstream 2000 false Chr07: 51935371-51937370 Eucalyptus grandis
Eucgr.G03076 5.0kb upstream 5.0kb upstream 9496 true Chr07: 51925875-51935370 Eucalyptus grandis
Eucgr.G03076 5.0kb upstream 5.0kb upstream 5000 false Chr07: 51925875-51930874 Eucalyptus grandis
Eucgr.G03076 5.0kb downstream 5.0kb downstream 9496 true Chr07: 51930875-51940370 Eucalyptus grandis
Eucgr.G03076 5.0kb downstream 5.0kb downstream 5000 false Chr07: 51935371-51940370 Eucalyptus grandis
Eucgr.G03076 10.0kb upstream 10.0kb upstream 14496 true Chr07: 51920875-51935370 Eucalyptus grandis
Eucgr.G03076 10.0kb upstream 10.0kb upstream 10000 false Chr07: 51920875-51930874 Eucalyptus grandis
Eucgr.G03076 10.0kb downstream 10.0kb downstream 14496 true Chr07: 51930875-51945370 Eucalyptus grandis
Eucgr.G03076 10.0kb downstream 10.0kb downstream 10000 false Chr07: 51935371-51945370 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069266 5270 Rosid View MSA
123741917 5271 Pentapetalae View MSA
122794409 5272 Eudicot View MSA
122048989 5273 Angiosperm View MSA
121348193 5274 Embryophyte View MSA
123425539 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.38461 0.0 21.6253    
cufflinks 10.5841 0.0 24.1424    
cufflinks 4.09386 0.0 10.0934   Low
cufflinks 9.57401 0.0 21.9538    
cufflinks 9.64149 0.0 22.029    
cufflinks 4.17085 0.0 10.3139   Low

0 Strain