Gene : Eucgr.G03043 E. grandis v2.0
Defline:  (1 of 1) PTHR19957:SF117 - SYNTAXIN-31 Genomic Order:  2515
Name:  ? Eucgr.G03043 Secondary Identifier:  ? PAC:32070196
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03043 0.5kb upstream 0.5kb upstream 4769 true Chr07: 51596286-51601054 Eucalyptus grandis
Eucgr.G03043 0.5kb upstream 0.5kb upstream 500 false Chr07: 51596286-51596785 Eucalyptus grandis
Eucgr.G03043 0.5kb downstream 0.5kb downstream 4769 true Chr07: 51596786-51601554 Eucalyptus grandis
Eucgr.G03043 0.5kb downstream 0.5kb downstream 500 false Chr07: 51601055-51601554 Eucalyptus grandis
Eucgr.G03043 1.0kb upstream 1.0kb upstream 5269 true Chr07: 51595786-51601054 Eucalyptus grandis
Eucgr.G03043 1.0kb upstream 1.0kb upstream 1000 false Chr07: 51595786-51596785 Eucalyptus grandis
Eucgr.G03043 1.0kb downstream 1.0kb downstream 5269 true Chr07: 51596786-51602054 Eucalyptus grandis
Eucgr.G03043 1.0kb downstream 1.0kb downstream 1000 false Chr07: 51601055-51602054 Eucalyptus grandis
Eucgr.G03043 2.0kb upstream 2.0kb upstream 6269 true Chr07: 51594786-51601054 Eucalyptus grandis
Eucgr.G03043 2.0kb upstream 2.0kb upstream 2000 false Chr07: 51594786-51596785 Eucalyptus grandis
Eucgr.G03043 2.0kb downstream 2.0kb downstream 6269 true Chr07: 51596786-51603054 Eucalyptus grandis
Eucgr.G03043 2.0kb downstream 2.0kb downstream 2000 false Chr07: 51601055-51603054 Eucalyptus grandis
Eucgr.G03043 5.0kb upstream 5.0kb upstream 9269 true Chr07: 51591786-51601054 Eucalyptus grandis
Eucgr.G03043 5.0kb upstream 5.0kb upstream 5000 false Chr07: 51591786-51596785 Eucalyptus grandis
Eucgr.G03043 5.0kb downstream 5.0kb downstream 9269 true Chr07: 51596786-51606054 Eucalyptus grandis
Eucgr.G03043 5.0kb downstream 5.0kb downstream 5000 false Chr07: 51601055-51606054 Eucalyptus grandis
Eucgr.G03043 10.0kb upstream 10.0kb upstream 14269 true Chr07: 51586786-51601054 Eucalyptus grandis
Eucgr.G03043 10.0kb upstream 10.0kb upstream 10000 false Chr07: 51586786-51596785 Eucalyptus grandis
Eucgr.G03043 10.0kb downstream 10.0kb downstream 14269 true Chr07: 51596786-51611054 Eucalyptus grandis
Eucgr.G03043 10.0kb downstream 10.0kb downstream 10000 false Chr07: 51601055-51611054 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124069079 5270 Rosid View MSA
123747067 5271 Pentapetalae View MSA
122787629 5272 Eudicot View MSA
122042562 5273 Angiosperm View MSA
121309986 5274 Embryophyte View MSA
123347598 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1326 0.0 23.9792   Low
cufflinks 54.9664 0.0 121.748 High High
cufflinks 9.41484 0.0 22.4728   Low
cufflinks 46.0426 0.0 101.823 High  
cufflinks 30.8501 0.0 68.4543    
cufflinks 20.4685 0.0 46.0264    

0 Strain