Gene : Eucgr.H00237 E. grandis v2.0
Defline:  (1 of 1) PF00856//PF13414 - SET domain (SET) // TPR repeat (TPR_11) Genomic Order:  1
Name:  ? Eucgr.H00237 Secondary Identifier:  ? PAC:32042531
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00237 0.5kb upstream 0.5kb upstream 12474 true Chr08: 170839-183312 Eucalyptus grandis
Eucgr.H00237 0.5kb upstream 0.5kb upstream 500 false Chr08: 182813-183312 Eucalyptus grandis
Eucgr.H00237 0.5kb downstream 0.5kb downstream 12474 true Chr08: 170339-182812 Eucalyptus grandis
Eucgr.H00237 0.5kb downstream 0.5kb downstream 500 false Chr08: 170339-170838 Eucalyptus grandis
Eucgr.H00237 1.0kb upstream 1.0kb upstream 12974 true Chr08: 170839-183812 Eucalyptus grandis
Eucgr.H00237 1.0kb upstream 1.0kb upstream 1000 false Chr08: 182813-183812 Eucalyptus grandis
Eucgr.H00237 1.0kb downstream 1.0kb downstream 12974 true Chr08: 169839-182812 Eucalyptus grandis
Eucgr.H00237 1.0kb downstream 1.0kb downstream 1000 false Chr08: 169839-170838 Eucalyptus grandis
Eucgr.H00237 2.0kb upstream 2.0kb upstream 13974 true Chr08: 170839-184812 Eucalyptus grandis
Eucgr.H00237 2.0kb upstream 2.0kb upstream 2000 false Chr08: 182813-184812 Eucalyptus grandis
Eucgr.H00237 2.0kb downstream 2.0kb downstream 13974 true Chr08: 168839-182812 Eucalyptus grandis
Eucgr.H00237 2.0kb downstream 2.0kb downstream 2000 false Chr08: 168839-170838 Eucalyptus grandis
Eucgr.H00237 5.0kb upstream 5.0kb upstream 16974 true Chr08: 170839-187812 Eucalyptus grandis
Eucgr.H00237 5.0kb upstream 5.0kb upstream 5000 false Chr08: 182813-187812 Eucalyptus grandis
Eucgr.H00237 5.0kb downstream 5.0kb downstream 16974 true Chr08: 165839-182812 Eucalyptus grandis
Eucgr.H00237 5.0kb downstream 5.0kb downstream 5000 false Chr08: 165839-170838 Eucalyptus grandis
Eucgr.H00237 10.0kb upstream 10.0kb upstream 21974 true Chr08: 170839-192812 Eucalyptus grandis
Eucgr.H00237 10.0kb upstream 10.0kb upstream 10000 false Chr08: 182813-192812 Eucalyptus grandis
Eucgr.H00237 10.0kb downstream 10.0kb downstream 21974 true Chr08: 160839-182812 Eucalyptus grandis
Eucgr.H00237 10.0kb downstream 10.0kb downstream 10000 false Chr08: 160839-170838 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124072039 5270 Rosid View MSA
123748863 5271 Pentapetalae View MSA
122787018 5272 Eudicot View MSA
122047928 5273 Angiosperm View MSA
121346419 5274 Embryophyte View MSA
123428850 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.10888 0.0 5.4182   Low
cufflinks 5.13432 0.0 11.9943    
cufflinks 2.92546 0.0 7.22381    
cufflinks 3.72147 0.0 8.92576    
cufflinks 6.96318 0.0 15.942   High
cufflinks 2.80639 0.0 7.05173    

0 Strain