Gene : Eucgr.H00243 E. grandis v2.0
Defline:  (1 of 1) PTHR11638:SF118 - CHAPERONE PROTEIN CLPD, CHLOROPLASTIC Genomic Order:  7
Name:  ? Eucgr.H00243 Secondary Identifier:  ? PAC:32040969
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00243 0.5kb upstream 0.5kb upstream 6632 true Chr08: 222723-229354 Eucalyptus grandis
Eucgr.H00243 0.5kb upstream 0.5kb upstream 500 false Chr08: 222723-223222 Eucalyptus grandis
Eucgr.H00243 0.5kb downstream 0.5kb downstream 6632 true Chr08: 223223-229854 Eucalyptus grandis
Eucgr.H00243 0.5kb downstream 0.5kb downstream 500 false Chr08: 229355-229854 Eucalyptus grandis
Eucgr.H00243 1.0kb upstream 1.0kb upstream 7132 true Chr08: 222223-229354 Eucalyptus grandis
Eucgr.H00243 1.0kb upstream 1.0kb upstream 1000 false Chr08: 222223-223222 Eucalyptus grandis
Eucgr.H00243 1.0kb downstream 1.0kb downstream 7132 true Chr08: 223223-230354 Eucalyptus grandis
Eucgr.H00243 1.0kb downstream 1.0kb downstream 1000 false Chr08: 229355-230354 Eucalyptus grandis
Eucgr.H00243 2.0kb upstream 2.0kb upstream 8132 true Chr08: 221223-229354 Eucalyptus grandis
Eucgr.H00243 2.0kb upstream 2.0kb upstream 2000 false Chr08: 221223-223222 Eucalyptus grandis
Eucgr.H00243 2.0kb downstream 2.0kb downstream 8132 true Chr08: 223223-231354 Eucalyptus grandis
Eucgr.H00243 2.0kb downstream 2.0kb downstream 2000 false Chr08: 229355-231354 Eucalyptus grandis
Eucgr.H00243 5.0kb upstream 5.0kb upstream 11132 true Chr08: 218223-229354 Eucalyptus grandis
Eucgr.H00243 5.0kb upstream 5.0kb upstream 5000 false Chr08: 218223-223222 Eucalyptus grandis
Eucgr.H00243 5.0kb downstream 5.0kb downstream 11132 true Chr08: 223223-234354 Eucalyptus grandis
Eucgr.H00243 5.0kb downstream 5.0kb downstream 5000 false Chr08: 229355-234354 Eucalyptus grandis
Eucgr.H00243 10.0kb upstream 10.0kb upstream 16132 true Chr08: 213223-229354 Eucalyptus grandis
Eucgr.H00243 10.0kb upstream 10.0kb upstream 10000 false Chr08: 213223-223222 Eucalyptus grandis
Eucgr.H00243 10.0kb downstream 10.0kb downstream 16132 true Chr08: 223223-239354 Eucalyptus grandis
Eucgr.H00243 10.0kb downstream 10.0kb downstream 10000 false Chr08: 229355-239354 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041323 5273 Angiosperm View MSA
124066848 5270 Rosid View MSA
123740697 5271 Pentapetalae View MSA
122787992 5272 Eudicot View MSA
121345985 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.4789 0.0 97.6865 High  
cufflinks 1.07759 0.0 3.26634   Low
cufflinks 36.6997 0.0 98.4708 High  
cufflinks 3.90782 0.0 11.5492    
cufflinks 2.53431 0.0 6.21356    
cufflinks 56.11 0.0 147.506 High High

0 Strain