Gene : Eucgr.H00196 E. grandis v2.0
Defline:  (1 of 2) PTHR23042:SF65 - TRANSCRIPTION FACTOR BHLH92 Genomic Order:  422
Name:  ? Eucgr.H00196 Secondary Identifier:  ? PAC:32045663
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00196 0.5kb upstream 0.5kb upstream 2318 true Chr08: 5716876-5719193 Eucalyptus grandis
Eucgr.H00196 0.5kb upstream 0.5kb upstream 500 false Chr08: 5718694-5719193 Eucalyptus grandis
Eucgr.H00196 0.5kb downstream 0.5kb downstream 2318 true Chr08: 5716376-5718693 Eucalyptus grandis
Eucgr.H00196 0.5kb downstream 0.5kb downstream 500 false Chr08: 5716376-5716875 Eucalyptus grandis
Eucgr.H00196 1.0kb upstream 1.0kb upstream 2818 true Chr08: 5716876-5719693 Eucalyptus grandis
Eucgr.H00196 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5718694-5719693 Eucalyptus grandis
Eucgr.H00196 1.0kb downstream 1.0kb downstream 2818 true Chr08: 5715876-5718693 Eucalyptus grandis
Eucgr.H00196 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5715876-5716875 Eucalyptus grandis
Eucgr.H00196 2.0kb upstream 2.0kb upstream 3818 true Chr08: 5716876-5720693 Eucalyptus grandis
Eucgr.H00196 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5718694-5720693 Eucalyptus grandis
Eucgr.H00196 2.0kb downstream 2.0kb downstream 3818 true Chr08: 5714876-5718693 Eucalyptus grandis
Eucgr.H00196 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5714876-5716875 Eucalyptus grandis
Eucgr.H00196 5.0kb upstream 5.0kb upstream 6818 true Chr08: 5716876-5723693 Eucalyptus grandis
Eucgr.H00196 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5718694-5723693 Eucalyptus grandis
Eucgr.H00196 5.0kb downstream 5.0kb downstream 6818 true Chr08: 5711876-5718693 Eucalyptus grandis
Eucgr.H00196 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5711876-5716875 Eucalyptus grandis
Eucgr.H00196 10.0kb upstream 10.0kb upstream 11818 true Chr08: 5716876-5728693 Eucalyptus grandis
Eucgr.H00196 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5718694-5728693 Eucalyptus grandis
Eucgr.H00196 10.0kb downstream 10.0kb downstream 11818 true Chr08: 5706876-5718693 Eucalyptus grandis
Eucgr.H00196 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5706876-5716875 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124064245 5270 Rosid View MSA
123737328 5271 Pentapetalae View MSA
122793301 5272 Eudicot View MSA
122043534 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.8545 0.0 40.2576   High
cufflinks 0.529617 0.0 1.70508 Low Low
cufflinks 21.1194 0.0 47.2661   High
cufflinks 2.49351 0.0 6.73587    
cufflinks 1.08691 0.0 3.20643    
cufflinks 0.979266 0.0 2.89528    

0 Strain