Gene : Eucgr.H00166 E. grandis v2.0
Defline:  (1 of 1) PTHR13505:SF7 - TRANSMEMBRANE PROTEIN 208 Genomic Order:  395
Name:  ? Eucgr.H00166 Secondary Identifier:  ? PAC:32041691
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00166 0.5kb upstream 0.5kb upstream 6676 true Chr08: 5405686-5412361 Eucalyptus grandis
Eucgr.H00166 0.5kb upstream 0.5kb upstream 500 false Chr08: 5405686-5406185 Eucalyptus grandis
Eucgr.H00166 0.5kb downstream 0.5kb downstream 6676 true Chr08: 5406186-5412861 Eucalyptus grandis
Eucgr.H00166 0.5kb downstream 0.5kb downstream 500 false Chr08: 5412362-5412861 Eucalyptus grandis
Eucgr.H00166 1.0kb upstream 1.0kb upstream 7176 true Chr08: 5405186-5412361 Eucalyptus grandis
Eucgr.H00166 1.0kb upstream 1.0kb upstream 1000 false Chr08: 5405186-5406185 Eucalyptus grandis
Eucgr.H00166 1.0kb downstream 1.0kb downstream 7176 true Chr08: 5406186-5413361 Eucalyptus grandis
Eucgr.H00166 1.0kb downstream 1.0kb downstream 1000 false Chr08: 5412362-5413361 Eucalyptus grandis
Eucgr.H00166 2.0kb upstream 2.0kb upstream 8176 true Chr08: 5404186-5412361 Eucalyptus grandis
Eucgr.H00166 2.0kb upstream 2.0kb upstream 2000 false Chr08: 5404186-5406185 Eucalyptus grandis
Eucgr.H00166 2.0kb downstream 2.0kb downstream 8176 true Chr08: 5406186-5414361 Eucalyptus grandis
Eucgr.H00166 2.0kb downstream 2.0kb downstream 2000 false Chr08: 5412362-5414361 Eucalyptus grandis
Eucgr.H00166 5.0kb upstream 5.0kb upstream 11176 true Chr08: 5401186-5412361 Eucalyptus grandis
Eucgr.H00166 5.0kb upstream 5.0kb upstream 5000 false Chr08: 5401186-5406185 Eucalyptus grandis
Eucgr.H00166 5.0kb downstream 5.0kb downstream 11176 true Chr08: 5406186-5417361 Eucalyptus grandis
Eucgr.H00166 5.0kb downstream 5.0kb downstream 5000 false Chr08: 5412362-5417361 Eucalyptus grandis
Eucgr.H00166 10.0kb upstream 10.0kb upstream 16176 true Chr08: 5396186-5412361 Eucalyptus grandis
Eucgr.H00166 10.0kb upstream 10.0kb upstream 10000 false Chr08: 5396186-5406185 Eucalyptus grandis
Eucgr.H00166 10.0kb downstream 10.0kb downstream 16176 true Chr08: 5406186-5422361 Eucalyptus grandis
Eucgr.H00166 10.0kb downstream 10.0kb downstream 10000 false Chr08: 5412362-5422361 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124065842 5270 Rosid View MSA
123736795 5271 Pentapetalae View MSA
122789495 5272 Eudicot View MSA
122042916 5273 Angiosperm View MSA
121345571 5274 Embryophyte View MSA
123425325 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.0558 0.0 40.1287    
cufflinks 33.5919 0.0 92.5905   High
cufflinks 14.5292 0.0 33.9304    
cufflinks 27.3679 0.0 62.6252   High
cufflinks 14.0941 0.0 33.0349    
cufflinks 15.0322 0.0 40.1916    

0 Strain