Gene : Eucgr.H00109 E. grandis v2.0
Defline:  (1 of 2) PTHR10333 - INHIBITOR OF GROWTH PROTEIN Genomic Order:  341
Name:  ? Eucgr.H00109 Secondary Identifier:  ? PAC:32045386
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00109 0.5kb upstream 0.5kb upstream 4781 true Chr08: 4851173-4855953 Eucalyptus grandis
Eucgr.H00109 0.5kb upstream 0.5kb upstream 500 false Chr08: 4851173-4851672 Eucalyptus grandis
Eucgr.H00109 0.5kb downstream 0.5kb downstream 4781 true Chr08: 4851673-4856453 Eucalyptus grandis
Eucgr.H00109 0.5kb downstream 0.5kb downstream 500 false Chr08: 4855954-4856453 Eucalyptus grandis
Eucgr.H00109 1.0kb upstream 1.0kb upstream 5281 true Chr08: 4850673-4855953 Eucalyptus grandis
Eucgr.H00109 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4850673-4851672 Eucalyptus grandis
Eucgr.H00109 1.0kb downstream 1.0kb downstream 5281 true Chr08: 4851673-4856953 Eucalyptus grandis
Eucgr.H00109 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4855954-4856953 Eucalyptus grandis
Eucgr.H00109 2.0kb upstream 2.0kb upstream 6281 true Chr08: 4849673-4855953 Eucalyptus grandis
Eucgr.H00109 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4849673-4851672 Eucalyptus grandis
Eucgr.H00109 2.0kb downstream 2.0kb downstream 6281 true Chr08: 4851673-4857953 Eucalyptus grandis
Eucgr.H00109 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4855954-4857953 Eucalyptus grandis
Eucgr.H00109 5.0kb upstream 5.0kb upstream 9281 true Chr08: 4846673-4855953 Eucalyptus grandis
Eucgr.H00109 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4846673-4851672 Eucalyptus grandis
Eucgr.H00109 5.0kb downstream 5.0kb downstream 9281 true Chr08: 4851673-4860953 Eucalyptus grandis
Eucgr.H00109 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4855954-4860953 Eucalyptus grandis
Eucgr.H00109 10.0kb upstream 10.0kb upstream 14281 true Chr08: 4841673-4855953 Eucalyptus grandis
Eucgr.H00109 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4841673-4851672 Eucalyptus grandis
Eucgr.H00109 10.0kb downstream 10.0kb downstream 14281 true Chr08: 4851673-4865953 Eucalyptus grandis
Eucgr.H00109 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4855954-4865953 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124063060 5270 Rosid View MSA
123742786 5271 Pentapetalae View MSA
122789662 5272 Eudicot View MSA
122046688 5273 Angiosperm View MSA
121343863 5274 Embryophyte View MSA
123426604 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.49583 0.0 19.6128    
cufflinks 2.55055 0.0 8.19949   Low
cufflinks 5.69825 0.0 15.6346    
cufflinks 7.30182 0.0 19.0055    
cufflinks 3.58319 0.0 11.0927    
cufflinks 7.33985 0.0 19.1635    

0 Strain