Gene : Eucgr.H00023 E. grandis v2.0
Defline:  (1 of 2) 2.4.2.29 - tRNA-guanine(34) transglycosylase / tRNA transglycosylase Genomic Order:  261
Name:  ? Eucgr.H00023 Secondary Identifier:  ? PAC:32041279
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00023 0.5kb upstream 0.5kb upstream 5183 true Chr08: 4028021-4033203 Eucalyptus grandis
Eucgr.H00023 0.5kb upstream 0.5kb upstream 500 false Chr08: 4032704-4033203 Eucalyptus grandis
Eucgr.H00023 0.5kb downstream 0.5kb downstream 5183 true Chr08: 4027521-4032703 Eucalyptus grandis
Eucgr.H00023 0.5kb downstream 0.5kb downstream 500 false Chr08: 4027521-4028020 Eucalyptus grandis
Eucgr.H00023 1.0kb upstream 1.0kb upstream 5683 true Chr08: 4028021-4033703 Eucalyptus grandis
Eucgr.H00023 1.0kb upstream 1.0kb upstream 1000 false Chr08: 4032704-4033703 Eucalyptus grandis
Eucgr.H00023 1.0kb downstream 1.0kb downstream 5683 true Chr08: 4027021-4032703 Eucalyptus grandis
Eucgr.H00023 1.0kb downstream 1.0kb downstream 1000 false Chr08: 4027021-4028020 Eucalyptus grandis
Eucgr.H00023 2.0kb upstream 2.0kb upstream 6683 true Chr08: 4028021-4034703 Eucalyptus grandis
Eucgr.H00023 2.0kb upstream 2.0kb upstream 2000 false Chr08: 4032704-4034703 Eucalyptus grandis
Eucgr.H00023 2.0kb downstream 2.0kb downstream 6683 true Chr08: 4026021-4032703 Eucalyptus grandis
Eucgr.H00023 2.0kb downstream 2.0kb downstream 2000 false Chr08: 4026021-4028020 Eucalyptus grandis
Eucgr.H00023 5.0kb upstream 5.0kb upstream 9683 true Chr08: 4028021-4037703 Eucalyptus grandis
Eucgr.H00023 5.0kb upstream 5.0kb upstream 5000 false Chr08: 4032704-4037703 Eucalyptus grandis
Eucgr.H00023 5.0kb downstream 5.0kb downstream 9683 true Chr08: 4023021-4032703 Eucalyptus grandis
Eucgr.H00023 5.0kb downstream 5.0kb downstream 5000 false Chr08: 4023021-4028020 Eucalyptus grandis
Eucgr.H00023 10.0kb upstream 10.0kb upstream 14683 true Chr08: 4028021-4042703 Eucalyptus grandis
Eucgr.H00023 10.0kb upstream 10.0kb upstream 10000 false Chr08: 4032704-4042703 Eucalyptus grandis
Eucgr.H00023 10.0kb downstream 10.0kb downstream 14683 true Chr08: 4018021-4032703 Eucalyptus grandis
Eucgr.H00023 10.0kb downstream 10.0kb downstream 10000 false Chr08: 4018021-4028020 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124070594 5270 Rosid View MSA
123742380 5271 Pentapetalae View MSA
122795128 5272 Eudicot View MSA
122048440 5273 Angiosperm View MSA
121348371 5274 Embryophyte View MSA
123426152 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.60618 0.0 15.7989   High
cufflinks 0.378975 0.0 1.22009 Low  
cufflinks 5.23319 0.0 12.7836    
cufflinks 0.235327 0.0 0.808053 Low Low
cufflinks 1.89792 0.0 5.12551    
cufflinks 1.2377 0.0 3.50238    

0 Strain