Gene : Eucgr.H05012 E. grandis v2.0
Defline:  (1 of 1) PTHR13068:SF5 - MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN Genomic Order:  1499
Name:  ? Eucgr.H05012 Secondary Identifier:  ? PAC:32071021
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H05012 0.5kb upstream 0.5kb upstream 3115 true Chr07: 36790561-36793675 Eucalyptus grandis
Eucgr.H05012 0.5kb upstream 0.5kb upstream 500 false Chr07: 36790561-36791060 Eucalyptus grandis
Eucgr.H05012 0.5kb downstream 0.5kb downstream 3115 true Chr07: 36791061-36794175 Eucalyptus grandis
Eucgr.H05012 0.5kb downstream 0.5kb downstream 500 false Chr07: 36793676-36794175 Eucalyptus grandis
Eucgr.H05012 1.0kb upstream 1.0kb upstream 3615 true Chr07: 36790061-36793675 Eucalyptus grandis
Eucgr.H05012 1.0kb upstream 1.0kb upstream 1000 false Chr07: 36790061-36791060 Eucalyptus grandis
Eucgr.H05012 1.0kb downstream 1.0kb downstream 3615 true Chr07: 36791061-36794675 Eucalyptus grandis
Eucgr.H05012 1.0kb downstream 1.0kb downstream 1000 false Chr07: 36793676-36794675 Eucalyptus grandis
Eucgr.H05012 2.0kb upstream 2.0kb upstream 4615 true Chr07: 36789061-36793675 Eucalyptus grandis
Eucgr.H05012 2.0kb upstream 2.0kb upstream 2000 false Chr07: 36789061-36791060 Eucalyptus grandis
Eucgr.H05012 2.0kb downstream 2.0kb downstream 4615 true Chr07: 36791061-36795675 Eucalyptus grandis
Eucgr.H05012 2.0kb downstream 2.0kb downstream 2000 false Chr07: 36793676-36795675 Eucalyptus grandis
Eucgr.H05012 5.0kb upstream 5.0kb upstream 7615 true Chr07: 36786061-36793675 Eucalyptus grandis
Eucgr.H05012 5.0kb upstream 5.0kb upstream 5000 false Chr07: 36786061-36791060 Eucalyptus grandis
Eucgr.H05012 5.0kb downstream 5.0kb downstream 7615 true Chr07: 36791061-36798675 Eucalyptus grandis
Eucgr.H05012 5.0kb downstream 5.0kb downstream 5000 false Chr07: 36793676-36798675 Eucalyptus grandis
Eucgr.H05012 10.0kb upstream 10.0kb upstream 12615 true Chr07: 36781061-36793675 Eucalyptus grandis
Eucgr.H05012 10.0kb upstream 10.0kb upstream 10000 false Chr07: 36781061-36791060 Eucalyptus grandis
Eucgr.H05012 10.0kb downstream 10.0kb downstream 12615 true Chr07: 36791061-36803675 Eucalyptus grandis
Eucgr.H05012 10.0kb downstream 10.0kb downstream 10000 false Chr07: 36793676-36803675 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041051 5273 Angiosperm View MSA
124063564 5270 Rosid View MSA
123745270 5271 Pentapetalae View MSA
122786345 5272 Eudicot View MSA
121348638 5274 Embryophyte View MSA
123427998 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.68547 0.0 7.14884    
cufflinks 0.446946 0.0 1.43893 Low  
cufflinks 0.748936 0.0 2.27326    
cufflinks 0.139692 0.0 0.52632 Low Low
cufflinks 0.317462 0.0 1.07472 Low  
cufflinks 5.05444 0.0 12.6854   High

0 Strain