Gene : Eucgr.H03199 E. grandis v2.0
Defline:  (1 of 18) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  1064
Name:  ? Eucgr.H03199 Secondary Identifier:  ? PAC:32072428
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03199 0.5kb upstream 0.5kb upstream 1148 true Chr07: 25427641-25428788 Eucalyptus grandis
Eucgr.H03199 0.5kb upstream 0.5kb upstream 500 false Chr07: 25427641-25428140 Eucalyptus grandis
Eucgr.H03199 0.5kb downstream 0.5kb downstream 1148 true Chr07: 25428141-25429288 Eucalyptus grandis
Eucgr.H03199 0.5kb downstream 0.5kb downstream 500 false Chr07: 25428789-25429288 Eucalyptus grandis
Eucgr.H03199 1.0kb upstream 1.0kb upstream 1648 true Chr07: 25427141-25428788 Eucalyptus grandis
Eucgr.H03199 1.0kb upstream 1.0kb upstream 1000 false Chr07: 25427141-25428140 Eucalyptus grandis
Eucgr.H03199 1.0kb downstream 1.0kb downstream 1648 true Chr07: 25428141-25429788 Eucalyptus grandis
Eucgr.H03199 1.0kb downstream 1.0kb downstream 1000 false Chr07: 25428789-25429788 Eucalyptus grandis
Eucgr.H03199 2.0kb upstream 2.0kb upstream 2648 true Chr07: 25426141-25428788 Eucalyptus grandis
Eucgr.H03199 2.0kb upstream 2.0kb upstream 2000 false Chr07: 25426141-25428140 Eucalyptus grandis
Eucgr.H03199 2.0kb downstream 2.0kb downstream 2648 true Chr07: 25428141-25430788 Eucalyptus grandis
Eucgr.H03199 2.0kb downstream 2.0kb downstream 2000 false Chr07: 25428789-25430788 Eucalyptus grandis
Eucgr.H03199 5.0kb upstream 5.0kb upstream 5648 true Chr07: 25423141-25428788 Eucalyptus grandis
Eucgr.H03199 5.0kb upstream 5.0kb upstream 5000 false Chr07: 25423141-25428140 Eucalyptus grandis
Eucgr.H03199 5.0kb downstream 5.0kb downstream 5648 true Chr07: 25428141-25433788 Eucalyptus grandis
Eucgr.H03199 5.0kb downstream 5.0kb downstream 5000 false Chr07: 25428789-25433788 Eucalyptus grandis
Eucgr.H03199 10.0kb upstream 10.0kb upstream 10648 true Chr07: 25418141-25428788 Eucalyptus grandis
Eucgr.H03199 10.0kb upstream 10.0kb upstream 10000 false Chr07: 25418141-25428140 Eucalyptus grandis
Eucgr.H03199 10.0kb downstream 10.0kb downstream 10648 true Chr07: 25428141-25438788 Eucalyptus grandis
Eucgr.H03199 10.0kb downstream 10.0kb downstream 10000 false Chr07: 25428789-25438788 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062491 5270 Rosid View MSA
123748225 5271 Pentapetalae View MSA
122793503 5272 Eudicot View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.955718 0.0 3.18683    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.748971 0.0 2.60385    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain