Gene : Eucgr.H03202 E. grandis v2.0
Defline:  (1 of 18) PF04450 - Peptidase of plants and bacteria (BSP) Genomic Order:  1065
Name:  ? Eucgr.H03202 Secondary Identifier:  ? PAC:32072997
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03202 0.5kb upstream 0.5kb upstream 1463 true Chr07: 25468747-25470209 Eucalyptus grandis
Eucgr.H03202 0.5kb upstream 0.5kb upstream 500 false Chr07: 25468747-25469246 Eucalyptus grandis
Eucgr.H03202 0.5kb downstream 0.5kb downstream 1463 true Chr07: 25469247-25470709 Eucalyptus grandis
Eucgr.H03202 0.5kb downstream 0.5kb downstream 500 false Chr07: 25470210-25470709 Eucalyptus grandis
Eucgr.H03202 1.0kb upstream 1.0kb upstream 1963 true Chr07: 25468247-25470209 Eucalyptus grandis
Eucgr.H03202 1.0kb upstream 1.0kb upstream 1000 false Chr07: 25468247-25469246 Eucalyptus grandis
Eucgr.H03202 1.0kb downstream 1.0kb downstream 1963 true Chr07: 25469247-25471209 Eucalyptus grandis
Eucgr.H03202 1.0kb downstream 1.0kb downstream 1000 false Chr07: 25470210-25471209 Eucalyptus grandis
Eucgr.H03202 2.0kb upstream 2.0kb upstream 2963 true Chr07: 25467247-25470209 Eucalyptus grandis
Eucgr.H03202 2.0kb upstream 2.0kb upstream 2000 false Chr07: 25467247-25469246 Eucalyptus grandis
Eucgr.H03202 2.0kb downstream 2.0kb downstream 2963 true Chr07: 25469247-25472209 Eucalyptus grandis
Eucgr.H03202 2.0kb downstream 2.0kb downstream 2000 false Chr07: 25470210-25472209 Eucalyptus grandis
Eucgr.H03202 5.0kb upstream 5.0kb upstream 5963 true Chr07: 25464247-25470209 Eucalyptus grandis
Eucgr.H03202 5.0kb upstream 5.0kb upstream 5000 false Chr07: 25464247-25469246 Eucalyptus grandis
Eucgr.H03202 5.0kb downstream 5.0kb downstream 5963 true Chr07: 25469247-25475209 Eucalyptus grandis
Eucgr.H03202 5.0kb downstream 5.0kb downstream 5000 false Chr07: 25470210-25475209 Eucalyptus grandis
Eucgr.H03202 10.0kb upstream 10.0kb upstream 10963 true Chr07: 25459247-25470209 Eucalyptus grandis
Eucgr.H03202 10.0kb upstream 10.0kb upstream 10000 false Chr07: 25459247-25469246 Eucalyptus grandis
Eucgr.H03202 10.0kb downstream 10.0kb downstream 10963 true Chr07: 25469247-25480209 Eucalyptus grandis
Eucgr.H03202 10.0kb downstream 10.0kb downstream 10000 false Chr07: 25470210-25480209 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062491 5270 Rosid View MSA
123748225 5271 Pentapetalae View MSA
122793503 5272 Eudicot View MSA
122049150 5273 Angiosperm View MSA
121350945 5274 Embryophyte View MSA
123381943 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8349 0.0 30.1521    
cufflinks 1.11562 0.0 3.36978    
cufflinks 18.8621 0.0 43.0935   High
cufflinks 0.539809 0.0 1.78433   Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.89703 0.0 14.8844    

0 Strain