Gene : Eucgr.H03207 E. grandis v2.0
Defline:  (1 of 2) PTHR11079:SF58 - RNA PSEUDOURIDINE SYNTHASE 4, MITOCHONDRIAL Genomic Order:  1070
Name:  ? Eucgr.H03207 Secondary Identifier:  ? PAC:32072441
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H03207 0.5kb upstream 0.5kb upstream 5037 true Chr07: 25633636-25638672 Eucalyptus grandis
Eucgr.H03207 0.5kb upstream 0.5kb upstream 500 false Chr07: 25633636-25634135 Eucalyptus grandis
Eucgr.H03207 0.5kb downstream 0.5kb downstream 5037 true Chr07: 25634136-25639172 Eucalyptus grandis
Eucgr.H03207 0.5kb downstream 0.5kb downstream 500 false Chr07: 25638673-25639172 Eucalyptus grandis
Eucgr.H03207 1.0kb upstream 1.0kb upstream 5537 true Chr07: 25633136-25638672 Eucalyptus grandis
Eucgr.H03207 1.0kb upstream 1.0kb upstream 1000 false Chr07: 25633136-25634135 Eucalyptus grandis
Eucgr.H03207 1.0kb downstream 1.0kb downstream 5537 true Chr07: 25634136-25639672 Eucalyptus grandis
Eucgr.H03207 1.0kb downstream 1.0kb downstream 1000 false Chr07: 25638673-25639672 Eucalyptus grandis
Eucgr.H03207 2.0kb upstream 2.0kb upstream 6537 true Chr07: 25632136-25638672 Eucalyptus grandis
Eucgr.H03207 2.0kb upstream 2.0kb upstream 2000 false Chr07: 25632136-25634135 Eucalyptus grandis
Eucgr.H03207 2.0kb downstream 2.0kb downstream 6537 true Chr07: 25634136-25640672 Eucalyptus grandis
Eucgr.H03207 2.0kb downstream 2.0kb downstream 2000 false Chr07: 25638673-25640672 Eucalyptus grandis
Eucgr.H03207 5.0kb upstream 5.0kb upstream 9537 true Chr07: 25629136-25638672 Eucalyptus grandis
Eucgr.H03207 5.0kb upstream 5.0kb upstream 5000 false Chr07: 25629136-25634135 Eucalyptus grandis
Eucgr.H03207 5.0kb downstream 5.0kb downstream 9537 true Chr07: 25634136-25643672 Eucalyptus grandis
Eucgr.H03207 5.0kb downstream 5.0kb downstream 5000 false Chr07: 25638673-25643672 Eucalyptus grandis
Eucgr.H03207 10.0kb upstream 10.0kb upstream 14537 true Chr07: 25624136-25638672 Eucalyptus grandis
Eucgr.H03207 10.0kb upstream 10.0kb upstream 10000 false Chr07: 25624136-25634135 Eucalyptus grandis
Eucgr.H03207 10.0kb downstream 10.0kb downstream 14537 true Chr07: 25634136-25648672 Eucalyptus grandis
Eucgr.H03207 10.0kb downstream 10.0kb downstream 10000 false Chr07: 25638673-25648672 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124062896 5270 Rosid View MSA
123739402 5271 Pentapetalae View MSA
122789155 5272 Eudicot View MSA
122044884 5273 Angiosperm View MSA
121348863 5274 Embryophyte View MSA
123426669 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.93561 0.0 7.37912    
cufflinks 0.286539 0.0 0.919836 Low Low
cufflinks 2.94621 0.0 7.37264    
cufflinks 0.471288 0.0 1.41783   Low
cufflinks 1.81514 0.0 4.77645    
cufflinks 2.52515 0.0 6.46638    

0 Strain