Gene : Eucgr.G03389 E. grandis v2.0
Defline:  (1 of 3) PTHR12595:SF6 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 9 Genomic Order:  2828
Name:  ? Eucgr.G03389 Secondary Identifier:  ? PAC:32072435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.G03389 0.5kb upstream 0.5kb upstream 5435 true Chr07: 54475216-54480650 Eucalyptus grandis
Eucgr.G03389 0.5kb upstream 0.5kb upstream 500 false Chr07: 54475216-54475715 Eucalyptus grandis
Eucgr.G03389 0.5kb downstream 0.5kb downstream 5435 true Chr07: 54475716-54481150 Eucalyptus grandis
Eucgr.G03389 0.5kb downstream 0.5kb downstream 500 false Chr07: 54480651-54481150 Eucalyptus grandis
Eucgr.G03389 1.0kb upstream 1.0kb upstream 5935 true Chr07: 54474716-54480650 Eucalyptus grandis
Eucgr.G03389 1.0kb upstream 1.0kb upstream 1000 false Chr07: 54474716-54475715 Eucalyptus grandis
Eucgr.G03389 1.0kb downstream 1.0kb downstream 5935 true Chr07: 54475716-54481650 Eucalyptus grandis
Eucgr.G03389 1.0kb downstream 1.0kb downstream 1000 false Chr07: 54480651-54481650 Eucalyptus grandis
Eucgr.G03389 2.0kb upstream 2.0kb upstream 6935 true Chr07: 54473716-54480650 Eucalyptus grandis
Eucgr.G03389 2.0kb upstream 2.0kb upstream 2000 false Chr07: 54473716-54475715 Eucalyptus grandis
Eucgr.G03389 2.0kb downstream 2.0kb downstream 6935 true Chr07: 54475716-54482650 Eucalyptus grandis
Eucgr.G03389 2.0kb downstream 2.0kb downstream 2000 false Chr07: 54480651-54482650 Eucalyptus grandis
Eucgr.G03389 5.0kb upstream 5.0kb upstream 9935 true Chr07: 54470716-54480650 Eucalyptus grandis
Eucgr.G03389 5.0kb upstream 5.0kb upstream 5000 false Chr07: 54470716-54475715 Eucalyptus grandis
Eucgr.G03389 5.0kb downstream 5.0kb downstream 9935 true Chr07: 54475716-54485650 Eucalyptus grandis
Eucgr.G03389 5.0kb downstream 5.0kb downstream 5000 false Chr07: 54480651-54485650 Eucalyptus grandis
Eucgr.G03389 10.0kb upstream 10.0kb upstream 14935 true Chr07: 54465716-54480650 Eucalyptus grandis
Eucgr.G03389 10.0kb upstream 10.0kb upstream 10000 false Chr07: 54465716-54475715 Eucalyptus grandis
Eucgr.G03389 10.0kb downstream 10.0kb downstream 14935 true Chr07: 54475716-54490650 Eucalyptus grandis
Eucgr.G03389 10.0kb downstream 10.0kb downstream 10000 false Chr07: 54480651-54490650 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124067490 5270 Rosid View MSA
123736681 5271 Pentapetalae View MSA
122786173 5272 Eudicot View MSA
122043931 5273 Angiosperm View MSA
121344953 5274 Embryophyte View MSA
123428826 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.06659 0.0 10.8804    
cufflinks 2.09507 0.0 6.17249    
cufflinks 2.76222 0.0 8.08663   High
cufflinks 2.31206 0.0 10.0456    
cufflinks 2.35001 0.0 8.42618    
cufflinks 1.78943 0.0 7.68926   Low

0 Strain