Gene : Eucgr.H00629 E. grandis v2.0
Defline:  (1 of 27) PTHR11102//PTHR11102:SF101 - SEL-1-LIKE PROTEIN Genomic Order:  562
Name:  ? Eucgr.H00629 Secondary Identifier:  ? PAC:32043042
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00629 0.5kb upstream 0.5kb upstream 3415 true Chr08: 8706976-8710390 Eucalyptus grandis
Eucgr.H00629 0.5kb upstream 0.5kb upstream 500 false Chr08: 8706976-8707475 Eucalyptus grandis
Eucgr.H00629 0.5kb downstream 0.5kb downstream 3415 true Chr08: 8707476-8710890 Eucalyptus grandis
Eucgr.H00629 0.5kb downstream 0.5kb downstream 500 false Chr08: 8710391-8710890 Eucalyptus grandis
Eucgr.H00629 1.0kb upstream 1.0kb upstream 3915 true Chr08: 8706476-8710390 Eucalyptus grandis
Eucgr.H00629 1.0kb upstream 1.0kb upstream 1000 false Chr08: 8706476-8707475 Eucalyptus grandis
Eucgr.H00629 1.0kb downstream 1.0kb downstream 3915 true Chr08: 8707476-8711390 Eucalyptus grandis
Eucgr.H00629 1.0kb downstream 1.0kb downstream 1000 false Chr08: 8710391-8711390 Eucalyptus grandis
Eucgr.H00629 2.0kb upstream 2.0kb upstream 4915 true Chr08: 8705476-8710390 Eucalyptus grandis
Eucgr.H00629 2.0kb upstream 2.0kb upstream 2000 false Chr08: 8705476-8707475 Eucalyptus grandis
Eucgr.H00629 2.0kb downstream 2.0kb downstream 4915 true Chr08: 8707476-8712390 Eucalyptus grandis
Eucgr.H00629 2.0kb downstream 2.0kb downstream 2000 false Chr08: 8710391-8712390 Eucalyptus grandis
Eucgr.H00629 5.0kb upstream 5.0kb upstream 7915 true Chr08: 8702476-8710390 Eucalyptus grandis
Eucgr.H00629 5.0kb upstream 5.0kb upstream 5000 false Chr08: 8702476-8707475 Eucalyptus grandis
Eucgr.H00629 5.0kb downstream 5.0kb downstream 7915 true Chr08: 8707476-8715390 Eucalyptus grandis
Eucgr.H00629 5.0kb downstream 5.0kb downstream 5000 false Chr08: 8710391-8715390 Eucalyptus grandis
Eucgr.H00629 10.0kb upstream 10.0kb upstream 12915 true Chr08: 8697476-8710390 Eucalyptus grandis
Eucgr.H00629 10.0kb upstream 10.0kb upstream 10000 false Chr08: 8697476-8707475 Eucalyptus grandis
Eucgr.H00629 10.0kb downstream 10.0kb downstream 12915 true Chr08: 8707476-8720390 Eucalyptus grandis
Eucgr.H00629 10.0kb downstream 10.0kb downstream 10000 false Chr08: 8710391-8720390 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124074242 5270 Rosid View MSA
123753146 5271 Pentapetalae View MSA
122797944 5272 Eudicot View MSA
122050591 5273 Angiosperm View MSA
121312011 5274 Embryophyte View MSA
123349228 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.1031 0.0 3.63409    
cufflinks 0.729637 0.0 2.60739 Low  
cufflinks 0.237144 0.0 1.07784 Low Low
cufflinks 1.13002 0.0 3.68447    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.38514 0.0 6.83577   High

0 Strain