Gene : Eucgr.H00433 E. grandis v2.0
Defline:  (1 of 3) PTHR12388 - MITOCHONDRIA ASSOCIATED GRANULOCYTE MACROPHAGE CSF SIGNALING MOLECULE Genomic Order:  164
Name:  ? Eucgr.H00433 Secondary Identifier:  ? PAC:32041022
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Eucgr.H00433 0.5kb upstream 0.5kb upstream 3192 true Chr08: 2429167-2432358 Eucalyptus grandis
Eucgr.H00433 0.5kb upstream 0.5kb upstream 500 false Chr08: 2431859-2432358 Eucalyptus grandis
Eucgr.H00433 0.5kb downstream 0.5kb downstream 3192 true Chr08: 2428667-2431858 Eucalyptus grandis
Eucgr.H00433 0.5kb downstream 0.5kb downstream 500 false Chr08: 2428667-2429166 Eucalyptus grandis
Eucgr.H00433 1.0kb upstream 1.0kb upstream 3692 true Chr08: 2429167-2432858 Eucalyptus grandis
Eucgr.H00433 1.0kb upstream 1.0kb upstream 1000 false Chr08: 2431859-2432858 Eucalyptus grandis
Eucgr.H00433 1.0kb downstream 1.0kb downstream 3692 true Chr08: 2428167-2431858 Eucalyptus grandis
Eucgr.H00433 1.0kb downstream 1.0kb downstream 1000 false Chr08: 2428167-2429166 Eucalyptus grandis
Eucgr.H00433 2.0kb upstream 2.0kb upstream 4692 true Chr08: 2429167-2433858 Eucalyptus grandis
Eucgr.H00433 2.0kb upstream 2.0kb upstream 2000 false Chr08: 2431859-2433858 Eucalyptus grandis
Eucgr.H00433 2.0kb downstream 2.0kb downstream 4692 true Chr08: 2427167-2431858 Eucalyptus grandis
Eucgr.H00433 2.0kb downstream 2.0kb downstream 2000 false Chr08: 2427167-2429166 Eucalyptus grandis
Eucgr.H00433 5.0kb upstream 5.0kb upstream 7692 true Chr08: 2429167-2436858 Eucalyptus grandis
Eucgr.H00433 5.0kb upstream 5.0kb upstream 5000 false Chr08: 2431859-2436858 Eucalyptus grandis
Eucgr.H00433 5.0kb downstream 5.0kb downstream 7692 true Chr08: 2424167-2431858 Eucalyptus grandis
Eucgr.H00433 5.0kb downstream 5.0kb downstream 5000 false Chr08: 2424167-2429166 Eucalyptus grandis
Eucgr.H00433 10.0kb upstream 10.0kb upstream 12692 true Chr08: 2429167-2441858 Eucalyptus grandis
Eucgr.H00433 10.0kb upstream 10.0kb upstream 10000 false Chr08: 2431859-2441858 Eucalyptus grandis
Eucgr.H00433 10.0kb downstream 10.0kb downstream 12692 true Chr08: 2419167-2431858 Eucalyptus grandis
Eucgr.H00433 10.0kb downstream 10.0kb downstream 10000 false Chr08: 2419167-2429166 Eucalyptus grandis

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124068380 5270 Rosid View MSA
123749245 5271 Pentapetalae View MSA
122793562 5272 Eudicot View MSA
122051009 5273 Angiosperm View MSA
121349876 5274 Embryophyte View MSA
123426047 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.2918 0.0 55.2903    
cufflinks 53.0936 0.0 117.504 High  
cufflinks 25.63 0.0 58.193    
cufflinks 53.1242 0.0 117.594 High  
cufflinks 43.747 0.0 97.1799 High  
cufflinks 8.95298 0.0 22.2517   Low

0 Strain